Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RN7SL814P-201ENST00000487715 300 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 MTCO3P15-201ENST00000526563 574 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC018552.1-201ENST00000562099 811 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL354943.1-201ENST00000572103 781 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC022662.1-201ENST00000580252 331 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AP001269.3-201ENST00000588718 329 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL360219.1-201ENST00000610230 366 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 VN1R74P-201ENST00000613259 503 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 uc_338.18-201ENST00000615451 175 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC011472.4-201ENST00000615848 491 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC120338.1-201ENST00000625074 1541 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-666P-201ENST00000363499 107 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RN7SKP224-201ENST00000364140 325 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-353P-201ENST00000364266 108 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 SNORA2.3-201ENST00000383920 135 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 SNORA68.2-201ENST00000391263 128 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RNA5SP113-201ENST00000410486 84 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RNA5SP498-201ENST00000411342 120 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC119751.6-201ENST00000416712 186 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 TAF13P2-201ENST00000416876 286 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 TRGV6-201ENST00000417928 299 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 MTND4P32-201ENST00000437189 1237 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC011753.3-201ENST00000443436 406 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC090804.1-201ENST00000448870 490 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 SLC25A18P1-201ENST00000449385 454 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 IGHV5-78-201ENST00000450948 295 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 CDC42P1-201ENST00000456658 548 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC091860.1-201ENST00000505723 432 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC113347.3-201ENST00000509113 148 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC138938.1-201ENST00000515431 782 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 PRELID3BP4-201ENST00000515476 571 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC079075.1-201ENST00000559543 878 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 RN7SL435P-201ENST00000584418 282 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 PRPF19P1-201ENST00000584766 898 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AL512782.1-201ENST00000603093 364 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AL158042.1-201ENST00000605338 460 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC122108.2-201ENST00000611946 526 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 OR8B1P-202ENST00000641132 1178 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC011447.7-201ENST00000624228 1590 ntBASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SSX2IPQ9Y2D8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC099654.2-201ENST00000433031 1980 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL731532.2-201ENST00000623542 1953 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms