Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 OR11H5P-202ENST00000641612 1325 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 MIR383-201ENST00000362257 73 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 MIR320B1-201ENST00000390209 79 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RNU6-244P-201ENST00000391028 104 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RPL23AP52-201ENST00000439311 478 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 CDC27P1-201ENST00000445384 715 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RPS15AP29-201ENST00000445539 400 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RPL7P31-201ENST00000450192 724 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 HMGB3P21-201ENST00000452483 547 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RPS27AP17-201ENST00000463344 455 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 RPS4XP18-201ENST00000495480 763 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC106785.1-201ENST00000565935 262 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 AC026979.4-201ENST00000606555 645 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 MIR492-201ENST00000638676 116 ntBASIC4.56□□□□□ -1.68
HPS4Q9NQG7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HPS4Q9NQG7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL359715.4-201ENST00000606629 1436 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 MFSD8-242ENST00000641690 4199 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC009501.3-201ENST00000605001 1352 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL158163.1-201ENST00000603915 1649 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 EOGT-210ENST00000615922 1931 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 RNU1-20P-201ENST00000363314 162 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 RNU6-666P-201ENST00000363499 107 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 SNORA11F-201ENST00000408237 128 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 NRBF2P2-201ENST00000413087 861 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 XKRY2-201ENST00000442362 1093 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC007537.2-201ENST00000472093 511 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 MIR2116-201ENST00000517221 80 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 SNRPGP1-201ENST00000553864 222 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL731537.2-201ENST00000561565 951 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC023762.1-201ENST00000603280 584 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 ABI1P1-201ENST00000603375 1120 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC079587.1-201ENST00000603846 277 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 COX6CP4-201ENST00000605798 228 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC055839.1-201ENST00000634467 498 ntBASIC4.55□□□□□ -1.68
HPS4Q9NQG7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HPS4Q9NQG7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms