Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AK4P4-201ENST00000419465 646 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 MTCYBP5-201ENST00000423752 1135 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 ATP5LP2-201ENST00000440646 311 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 RN7SL221P-201ENST00000466190 281 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 HMGB1P36-201ENST00000487709 576 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 DUTP7-201ENST00000507982 486 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 RNU6-1003P-201ENST00000517099 105 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 DEFB108A-201ENST00000530110 222 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AL121594.2-201ENST00000541658 472 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 RPL21P5-201ENST00000554662 472 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 CENPUP2-201ENST00000555897 1186 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC233702.7-202ENST00000582941 211 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AL022154.1-201ENST00000604698 785 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC245014.3-201ENST00000618589 347 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AL160394.1-201ENST00000624765 724 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC073488.3-201ENST00000631611 778 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC008758.3-201ENST00000507003 1829 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AC024651.2-201ENST00000562480 2098 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 CCT4P2-201ENST00000233836 1548 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AL451142.1-201ENST00000375867 775 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC245096.1-201ENST00000413104 546 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 CYCSP10-201ENST00000417973 294 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AL445669.1-201ENST00000426743 755 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 BX890604.2-201ENST00000427883 474 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AL022238.1-201ENST00000442557 355 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC010733.1-201ENST00000451515 401 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 IFNWP4-201ENST00000453148 294 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC093899.1-201ENST00000457984 376 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AP001992.1-205ENST00000462248 379 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 RN7SL165P-201ENST00000477476 291 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC005798.1-201ENST00000513715 387 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP340-201ENST00000517132 107 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AP003396.4-201ENST00000527574 265 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC073916.1-201ENST00000545095 130 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC073534.2-201ENST00000620377 381 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC110994.2-201ENST00000635481 492 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 OR5AK4P-201ENST00000635912 903 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC232271.1-201ENST00000602455 2715 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 ZNF33CP-201ENST00000432492 2030 ntBASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TRAIPQ9BWF2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL662795.2-201ENST00000624252 3706 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 GUCY1B2-204ENST00000531898 1979 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RBMY1HP-201ENST00000382759 1389 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 Y_RNA.41-201ENST00000362646 102 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RNU1-134P-201ENST00000362935 165 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms