Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 MIR4437-201ENST00000581331 60 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 OR7E94P-202ENST00000601375 790 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 Z98751.3-201ENST00000604447 521 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AL022238.3-201ENST00000609279 443 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC103858.2-201ENST00000621471 543 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 DDX10P2-201ENST00000417796 2614 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 BDP1P-201ENST00000582658 1990 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.71□□□□□ -1.34
USB1Q9BQ65 MAPK10-365ENST00000641902 3825 ntBASIC6.71□□□□□ -1.34
USB1Q9BQ65 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USB1Q9BQ65 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 Y_RNA.477-201ENST00000384352 108 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 SNORA24.1-201ENST00000384401 135 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 Y_RNA.555-201ENST00000384673 110 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AL109755.1-201ENST00000401791 649 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AL136372.1-201ENST00000403060 228 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 RNU2-5P-201ENST00000410533 180 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC009237.9-201ENST00000414800 347 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC114491.1-201ENST00000416095 246 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 PIGPP3-201ENST00000425307 415 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 PPIAP13-201ENST00000434706 478 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 HIGD1AP11-201ENST00000438361 280 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC114755.1-201ENST00000453101 868 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC116533.1-201ENST00000459748 321 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC104472.2-201ENST00000469035 601 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 RN7SL332P-201ENST00000482163 254 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC009901.1-201ENST00000506703 541 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC025465.3-201ENST00000510570 311 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AP000435.1-201ENST00000528539 496 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AP001858.2-201ENST00000536213 601 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 BOLA2P1-201ENST00000584794 232 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC006254.3-201ENST00000603353 884 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 AC012510.1-201ENST00000607946 759 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.7□□□□□ -1.34
USB1Q9BQ65 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
USB1Q9BQ65 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USB1Q9BQ65 SOCS5P3-201ENST00000425115 1576 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms