Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 RNA5SP514-201ENST00000363717 111 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 RNU1-115P-201ENST00000365329 160 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 Y_RNA.380-201ENST00000365663 111 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 Y_RNA.483-201ENST00000384380 101 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 MIR575-201ENST00000385013 94 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC017035.1-201ENST00000411999 1115 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 ATG3P1-201ENST00000419507 911 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 PNKDP1-201ENST00000435914 430 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AL138787.1-202ENST00000437804 898 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC114755.4-201ENST00000439114 443 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC097463.1-201ENST00000447288 481 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 MTND4LP30-201ENST00000454092 297 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 RPL31P50-201ENST00000471002 296 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC093870.1-201ENST00000506837 213 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 SNORA81.3-201ENST00000517283 198 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC068993.1-201ENST00000546724 589 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC090651.1-201ENST00000567865 634 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 IGHV3-29-201ENST00000604817 344 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AP005212.3-201ENST00000619964 528 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AL359263.1-201ENST00000441188 2796 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC125603.4-201ENST00000621942 2699 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC097504.1-201ENST00000515103 2415 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 Y_RNA.562-201ENST00000384695 113 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 SNORA75.6-201ENST00000391318 127 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RNA5SP498-201ENST00000411342 120 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC096775.1-201ENST00000437724 448 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 COX4I1P2-201ENST00000447446 547 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC009963.3-201ENST00000458090 486 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RPS29P15-201ENST00000458329 171 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RNU7-180P-201ENST00000459240 63 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RPL7P5-201ENST00000471472 736 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC007998.1-201ENST00000474156 672 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 FO393415.2-201ENST00000480085 343 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RN7SL273P-201ENST00000481561 299 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC092436.1-201ENST00000506450 503 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 ZNF519P4-201ENST00000514008 125 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 RNA5SP318-201ENST00000516352 92 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AP001804.2-201ENST00000533932 910 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 HMGB3P26-201ENST00000560051 582 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC104662.1-201ENST00000604448 511 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC073488.6-201ENST00000632293 754 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms