Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AP001189.2-201ENST00000527320 189 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC133552.5-201ENST00000604266 540 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC005332.6-201ENST00000613178 446 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC074140.1-201ENST00000621617 208 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC008443.7-201ENST00000622195 246 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC124312.6-202ENST00000623624 418 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 SAMMSON-227ENST00000642114 1199 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 TRIM51GP-201ENST00000534741 1350 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 CASC19-221ENST00000641309 1382 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RNU6-621P-201ENST00000364752 109 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SPTLC1P2-201ENST00000407089 121 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RNU6-272P-201ENST00000411028 104 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 BRWD1P3-201ENST00000428816 390 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC005033.1-201ENST00000428904 813 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SKP1P3-201ENST00000429280 487 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LYPLA1P1-201ENST00000434514 622 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AL360221.1-201ENST00000445989 335 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RPL37P3-201ENST00000456825 293 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RPS4XP12-201ENST00000461747 709 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RN7SL515P-201ENST00000463999 297 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 NCOR1P1-202ENST00000486162 291 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SNRPCP2-201ENST00000504370 475 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC005178.1-201ENST00000508392 440 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC100784.1-201ENST00000522790 310 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 HAUS8P1-201ENST00000549005 542 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC004217.3-201ENST00000551552 878 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC012435.1-202ENST00000568772 240 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AP000811.1-201ENST00000603803 651 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC064872.1-201ENST00000604823 1072 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 AC026585.1-201ENST00000619582 524 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTHRC1Q96CG8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms