Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AL118496.1-201ENST00000440201 1812 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 RPL21P132-201ENST00000331267 462 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 Y_RNA.1-201ENST00000352915 104 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 RNU6-1026P-201ENST00000384465 108 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 HMGB3P18-201ENST00000406327 590 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 MRPL53P1-201ENST00000414323 319 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC009161.1-201ENST00000417306 376 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AL356583.2-201ENST00000426536 280 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 MTCYBP9-201ENST00000431021 303 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC126120.1-201ENST00000431082 470 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AL663074.2-201ENST00000440621 479 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 SETP20-201ENST00000457046 852 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 SNORD19B-201ENST00000459623 84 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 HMGB1P41-201ENST00000520234 440 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 IGLV3-30-201ENST00000524362 298 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC018558.5-201ENST00000565840 952 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC020914.6-201ENST00000594327 272 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 FAM27E4-201ENST00000605259 342 ntBASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEDD1Q8NHV4 AC130304.1-201ENST00000622942 2385 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 OR52B1P-201ENST00000316506 909 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RNU6-433P-201ENST00000363216 104 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RNA5SP435-201ENST00000364044 108 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RN7SKP78-201ENST00000364711 318 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RNU6-1103P-201ENST00000384150 107 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AL049693.1-201ENST00000402760 611 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 HMGB3P31-201ENST00000413333 595 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RPS24P6-201ENST00000452670 400 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 SNRPFP4-201ENST00000456366 242 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 snoU109.1-201ENST00000459339 135 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RPS17P15-201ENST00000475609 349 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RN7SL273P-201ENST00000481561 299 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC010587.1-201ENST00000505809 469 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RNU7-30P-201ENST00000516835 62 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 RNU6-943P-201ENST00000516960 98 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 OR6C73P-201ENST00000546432 358 ntBASIC6.91□□□□□ -1.3
NEDD1Q8NHV4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms