Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC022968.1-201ENST00000567372 442 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AL355365.1-201ENST00000616480 294 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC124312.6-202ENST00000623624 418 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 RNA5SP187-201ENST00000384400 119 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 ZNF602P-201ENST00000405929 924 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 RBMY1KP-201ENST00000423480 476 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 ATP5JP1-201ENST00000431631 322 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 MTND6P32-201ENST00000457611 483 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 HMGB1P21-201ENST00000502313 581 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 IGHV3-32-201ENST00000519182 355 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC104662.1-201ENST00000604448 511 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 ATE1-AS1-202ENST00000636460 506 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 RNA5SP267-201ENST00000364893 126 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 DPY19L1P2-201ENST00000426647 915 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC034105.3-201ENST00000565294 442 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 MIR4433B-201ENST00000581329 102 ntBASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD3Q7Z407 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AP002512.4-202ENST00000641599 4530 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC096644.3-201ENST00000416788 338 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 CYCSP28-201ENST00000534284 321 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 CR383656.14-201ENST00000551951 406 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 SNORD17-201ENST00000390930 237 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 VDAC1P9-201ENST00000412766 841 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 PHBP14-201ENST00000512887 367 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AL451142.2-201ENST00000429076 2090 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC139426.3-201ENST00000605648 2059 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 RNU6-729P-201ENST00000384399 107 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 OSTCP5-201ENST00000425293 453 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC127024.5-201ENST00000580085 462 ntBASIC2.63□□□□□ -1.99
CSMD3Q7Z407 AC005086.4-201ENST00000623065 213 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms