Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SL622P-201ENST00000585292 275 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RNF138P2-201ENST00000603490 592 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC024595.1-201ENST00000623088 387 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC138907.10-201ENST00000623708 983 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC067931.1-201ENST00000624190 671 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC006927.2-201ENST00000639256 389 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC119744.1-201ENST00000454746 1715 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ZNF849P-201ENST00000594711 1566 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 NCLP2-201ENST00000416078 1462 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 U3.35-201ENST00000408405 208 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC004987.3-201ENST00000413879 771 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC006466.1-201ENST00000438721 289 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AL772161.1-201ENST00000439130 476 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 TPT1P1-201ENST00000458495 518 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC092324.1-201ENST00000468671 324 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 RPL7L1P13-201ENST00000511702 739 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC010374.2-201ENST00000512933 535 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 RN7SKP96-201ENST00000516948 297 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 RNU6-709P-201ENST00000517257 104 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC010735.1-201ENST00000567305 1026 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 MIR4737-201ENST00000583979 81 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC022726.1-201ENST00000587475 207 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AP002906.1-201ENST00000603405 233 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AL031320.1-201ENST00000604177 357 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 RNA5SP108-201ENST00000605921 117 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC124016.2-201ENST00000610058 665 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC097505.1-201ENST00000610199 565 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC009269.6-201ENST00000621778 588 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC012414.7-202ENST00000622705 1090 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AL672167.1-205ENST00000641112 3080 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ZFRP1-201ENST00000457579 2970 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 TLK1P1-201ENST00000456760 2440 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC009643.2-201ENST00000603543 1448 ntBASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP54Q7Z3B4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC008549.2-201ENST00000333482 706 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RNU6-356P-201ENST00000384140 107 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL035419.1-201ENST00000397037 564 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RNA5SP113-201ENST00000410486 84 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 NUP35P2-201ENST00000416748 943 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC241520.1-201ENST00000422654 1099 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RPS17P8-201ENST00000434525 335 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 HSFY3P-201ENST00000444242 1191 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RHEBP2-201ENST00000450289 600 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL445433.1-201ENST00000457507 257 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC063943.1-201ENST00000465434 453 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC090071.1-201ENST00000507713 644 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 HMGB3P13-201ENST00000511263 607 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 RN7SKP234-201ENST00000517173 224 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms