Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AL161912.2-201ENST00000565707 3007 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC069306.1-201ENST00000507006 843 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC084036.1-201ENST00000609190 508 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 MIR7106-201ENST00000612419 65 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 RBMY2UP-201ENST00000453474 324 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 MTND6P32-201ENST00000457611 483 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS13CQ709C8 AC068722.2-201ENST00000618734 544 ntBASIC3.04□□□□□ -1.92
VPS13CQ709C8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS13CQ709C8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 EIF4A1P11-201ENST00000451239 222 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 RPL7L1P13-201ENST00000511702 739 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 OR7E13P-201ENST00000526052 910 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC008966.2-201ENST00000606157 453 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 RNU6-729P-201ENST00000384399 107 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 RPL27AP5-201ENST00000469428 449 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC016839.1-201ENST00000578162 867 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC083837.1-201ENST00000565297 2994 ntBASIC3.03□□□□□ -1.92
VPS13CQ709C8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13CQ709C8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS13CQ709C8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
VPS13CQ709C8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.93
VPS13CQ709C8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
VPS13CQ709C8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
VPS13CQ709C8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 RNA5SP80-201ENST00000410475 111 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 OR5M7P-201ENST00000526140 972 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AL049844.2-201ENST00000604280 628 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 AL732618.1-201ENST00000623251 301 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 OR2AH1P-201ENST00000425717 928 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms