Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SNORA76.2-201ENST00000517095 137 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC087272.1-201ENST00000523624 533 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL023881.1-201ENST00000621088 301 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC007546.2-201ENST00000623996 360 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC073342.3-201ENST00000624211 193 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC016717.3-201ENST00000624730 554 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL049536.1-201ENST00000625043 744 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 MIR6715B-201ENST00000637172 77 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 LINC00622-201ENST00000562811 1570 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 OR4K15-201ENST00000305051 1216 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC079741.1-201ENST00000321498 212 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RNA5SP52-201ENST00000362448 134 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RNA5SP307-201ENST00000362863 116 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RNVU1-6-201ENST00000364688 164 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 OR52E6-202ENST00000379946 954 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RNU6-1279P-201ENST00000383917 103 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 CYB5AP4-201ENST00000396692 399 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 SDHCP2-201ENST00000398565 501 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC004022.2-201ENST00000413824 193 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC119751.6-201ENST00000416712 186 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 UQCRBP1-201ENST00000421129 336 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 GTF2IP2-201ENST00000424290 697 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 IPMKP1-201ENST00000425988 855 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC005189.1-201ENST00000431286 310 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC105402.2-201ENST00000438503 358 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC011753.3-201ENST00000443436 406 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RPL7P33-201ENST00000444159 742 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 YWHAQP9-201ENST00000445891 512 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 VN1R32P-201ENST00000452234 905 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC007686.1-201ENST00000488511 463 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC008562.1-201ENST00000521763 330 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC069240.1-201ENST00000548774 375 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 RPL23AP97-201ENST00000568955 471 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC005034.4-201ENST00000603612 899 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AL160290.3-201ENST00000604869 165 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC245389.2-201ENST00000616023 576 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC243756.2-201ENST00000618406 463 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC242843.1-201ENST00000618702 573 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 U6.107-201ENST00000637108 79 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 CPHL1P-201ENST00000461341 3407 ntBASIC4.03□□□□□ -1.76
NIPAL3Q6P499 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NIPAL3Q6P499 AC090229.1-201ENST00000590983 1609 ntBASIC4.03□□□□□ -1.77
NIPAL3Q6P499 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 AC125257.1-201ENST00000560400 2930 ntBASIC4.02□□□□□ -1.77
NIPAL3Q6P499 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 AC053481.2-202ENST00000582394 1500 ntBASIC4.02□□□□□ -1.77
NIPAL3Q6P499 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NIPAL3Q6P499 RNA5SP505-201ENST00000364748 108 ntBASIC4.02□□□□□ -1.77
NIPAL3Q6P499 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms