Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC139495.1-202ENST00000513164 354 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 MTND4LP31-201ENST00000514859 294 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 MTCO1P49-201ENST00000523429 802 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 HMGB2P1-201ENST00000591146 634 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 PSMA6P4-201ENST00000603247 718 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC009318.3-201ENST00000616916 503 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AL590410.1-201ENST00000617925 333 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ENSAP1-201ENST00000392855 326 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL078604.1-201ENST00000404609 466 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 GSTM3P2-201ENST00000412746 530 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL450992.3-201ENST00000413192 568 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AJ239321.1-201ENST00000424255 564 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 OR8F1P-201ENST00000425243 930 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC006011.1-201ENST00000442758 349 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC112206.1-201ENST00000468416 477 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ARL4AP1-201ENST00000503220 705 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL049844.2-201ENST00000604280 628 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC010200.2-201ENST00000605098 235 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 AC039056.2-201ENST00000622261 511 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 OR8B1P-202ENST00000641132 1178 ntBASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM1Q2M3G4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 MFSD8-242ENST00000641690 4199 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 RNA5SP124-201ENST00000362739 110 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 IPMKP1-201ENST00000425988 855 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 EIF2S2P5-201ENST00000457635 968 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC034236.1-201ENST00000469891 373 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC010627.1-201ENST00000503819 1294 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 HPRT1P2-201ENST00000505250 544 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC113430.1-201ENST00000506872 718 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 NPM1P41-201ENST00000512920 831 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 VTA1P2-201ENST00000520205 911 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms