Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM6P62312 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LSM6P62312 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LSM6P62312 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.67□□□□□ -1.82
LSM6P62312 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.66□□□□□ -1.82
LSM6P62312 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 RNU4-39P-201ENST00000362455 127 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AC009480.2-201ENST00000422916 432 ntBASIC3.66□□□□□ -1.82
LSM6P62312 DNAJC19P7-201ENST00000428811 344 ntBASIC3.66□□□□□ -1.82
LSM6P62312 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.66□□□□□ -1.82
LSM6P62312 CYCSP42-201ENST00000450823 238 ntBASIC3.66□□□□□ -1.82
LSM6P62312 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.66□□□□□ -1.82
LSM6P62312 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 AC109327.1-201ENST00000471666 403 ntBASIC3.66□□□□□ -1.82
LSM6P62312 RN7SL271P-201ENST00000487601 295 ntBASIC3.66□□□□□ -1.82
LSM6P62312 RPS23P1-201ENST00000491662 432 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM6P62312 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 AC093840.1-201ENST00000511599 336 ntBASIC3.66□□□□□ -1.82
LSM6P62312 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM6P62312 AC099522.1-202ENST00000514718 367 ntBASIC3.66□□□□□ -1.82
LSM6P62312 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LSM6P62312 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.66□□□□□ -1.82
LSM6P62312 AL161713.1-201ENST00000555538 145 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 TVP23BP1-201ENST00000557500 617 ntBASIC3.66□□□□□ -1.82
LSM6P62312 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM6P62312 AL360157.1-201ENST00000565962 87 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM6P62312 AC084373.1-201ENST00000603311 235 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AL161729.3-201ENST00000603533 673 ntBASIC3.66□□□□□ -1.82
LSM6P62312 AC022960.2-201ENST00000616300 666 ntBASIC3.66□□□□□ -1.82
LSM6P62312 C2orf27A-204ENST00000623058 969 ntBASIC3.66□□□□□ -1.82
LSM6P62312 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
LSM6P62312 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LSM6P62312 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM6P62312 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LSM6P62312 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.65□□□□□ -1.82
LSM6P62312 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LSM6P62312 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LSM6P62312 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LSM6P62312 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.65□□□□□ -1.82
LSM6P62312 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LSM6P62312 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 IGKV7-3-201ENST00000357453 298 ntBASIC3.65□□□□□ -1.83
LSM6P62312 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LSM6P62312 SNORA37-201ENST00000384504 129 ntBASIC3.65□□□□□ -1.83
LSM6P62312 MIR585-201ENST00000384887 94 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AP000357.1-201ENST00000409926 1165 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.65□□□□□ -1.83
LSM6P62312 GSTA7P-201ENST00000438425 448 ntBASIC3.65□□□□□ -1.83
LSM6P62312 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 HMGB1P16-201ENST00000447155 540 ntBASIC3.65□□□□□ -1.83
LSM6P62312 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LSM6P62312 AC018635.1-201ENST00000468292 1030 ntBASIC3.65□□□□□ -1.83
LSM6P62312 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM6P62312 AC005912.1-201ENST00000495392 255 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.65□□□□□ -1.83
LSM6P62312 AC141257.3-201ENST00000572906 215 ntBASIC3.65□□□□□ -1.83
LSM6P62312 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 AC104662.1-201ENST00000604448 511 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AC010857.1-201ENST00000606398 594 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AL121890.3-201ENST00000618494 516 ntBASIC3.65□□□□□ -1.83
LSM6P62312 AC103858.2-201ENST00000621471 543 ntBASIC3.65□□□□□ -1.83
LSM6P62312 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM6P62312 AC025125.1-201ENST00000624743 1922 ntBASIC3.65□□□□□ -1.83
LSM6P62312 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.65□□□□□ -1.83
LSM6P62312 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LSM6P62312 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LSM6P62312 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LSM6P62312 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LSM6P62312 MIR937-201ENST00000401271 86 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AL138878.1-201ENST00000405131 347 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AMZ2P2-201ENST00000406819 1057 ntBASIC3.64□□□□□ -1.83
LSM6P62312 RPL26P29-201ENST00000415623 438 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AC234779.1-201ENST00000425910 285 ntBASIC3.64□□□□□ -1.83
LSM6P62312 NPM1P24-201ENST00000428039 894 ntBASIC3.64□□□□□ -1.83
LSM6P62312 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms