Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 COX6B1P1-201ENST00000415962 213 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.46□□□□□ -1.7
CASQ1P31415 AC096638.2-201ENST00000434965 711 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 BUD31P2-201ENST00000449374 300 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 DHFRP3-201ENST00000455595 559 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 CFTRP1-201ENST00000456646 183 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 RPL5P13-201ENST00000462840 709 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 RPS29P19-201ENST00000479709 171 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 RPL7P16-201ENST00000479738 738 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.46□□□□□ -1.7
CASQ1P31415 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.46□□□□□ -1.7
CASQ1P31415 AP000827.1-201ENST00000527814 258 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.46□□□□□ -1.7
CASQ1P31415 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.46□□□□□ -1.7
CASQ1P31415 AP001781.1-201ENST00000530977 207 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.46□□□□□ -1.7
CASQ1P31415 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.46□□□□□ -1.7
CASQ1P31415 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.46□□□□□ -1.7
CASQ1P31415 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.46□□□□□ -1.7
CASQ1P31415 AP001160.4-201ENST00000596971 382 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.46□□□□□ -1.7
CASQ1P31415 AP005264.7-201ENST00000625003 745 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CASQ1P31415 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 NCAPGP1-201ENST00000505112 1814 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASQ1P31415 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CASQ1P31415 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 AC008033.1-201ENST00000216407 1162 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.45□□□□□ -1.7
CASQ1P31415 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CASQ1P31415 RNA5SP498-201ENST00000411342 120 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.45□□□□□ -1.7
CASQ1P31415 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.45□□□□□ -1.7
CASQ1P31415 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.45□□□□□ -1.7
CASQ1P31415 MTCYBP21-201ENST00000443300 1113 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 PPIAP3-201ENST00000450588 505 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 RPS20P32-201ENST00000456044 356 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 RNU7-170P-201ENST00000459303 61 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 SNRPGP3-201ENST00000469405 227 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 AC078785.3-201ENST00000476607 425 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 RPL7P51-201ENST00000490532 749 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 BTF3L4P4-201ENST00000506381 449 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.45□□□□□ -1.7
CASQ1P31415 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.45□□□□□ -1.7
CASQ1P31415 RNU6-1231P-201ENST00000517185 103 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.45□□□□□ -1.7
CASQ1P31415 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.45□□□□□ -1.7
CASQ1P31415 AP004242.1-201ENST00000533701 349 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.45□□□□□ -1.7
CASQ1P31415 EDDM3DP-201ENST00000554692 434 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 AC025175.1-201ENST00000606482 759 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 AC015813.6-201ENST00000624409 5808 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CASQ1P31415 AC000367.1-201ENST00000452711 1766 ntBASIC4.45□□□□□ -1.7
CASQ1P31415 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASQ1P31415 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CASQ1P31415 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.44□□□□□ -1.7
CASQ1P31415 AF127577.6-201ENST00000623352 2191 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CASQ1P31415 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CASQ1P31415 AC119744.1-201ENST00000454746 1715 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CASQ1P31415 RNA5SP397-201ENST00000391323 118 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CASQ1P31415 AC009237.5-201ENST00000414271 501 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
CASQ1P31415 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CASQ1P31415 EEF1B2P5-201ENST00000444820 548 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 RPL23AP81-201ENST00000455252 467 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 AC005532.2-201ENST00000467154 373 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 RPL7L1P8-201ENST00000469911 741 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 AC007537.2-201ENST00000472093 511 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 RPL30P11-201ENST00000495304 339 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 AC104109.1-201ENST00000498563 436 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC023141.12-201ENST00000512399 199 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC005798.1-201ENST00000513715 387 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 IGKV2-23-201ENST00000518729 323 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CASQ1P31415 PTP4A1P6-201ENST00000531034 478 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.44□□□□□ -1.7
CASQ1P31415 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms