Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFRAP16234 RNA5SP497-201ENST00000516081 97 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFRAP16234 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ELOCP28-201ENST00000590044 317 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 RPL26P30-202ENST00000602923 645 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC020634.1-201ENST00000608701 549 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC084824.5-201ENST00000612009 413 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 U6.48-201ENST00000618523 106 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC095038.2-201ENST00000621464 1070 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFRAP16234 MTCO1P4-201ENST00000520516 1409 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFRAP16234 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFRAP16234 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 RAD17P1-201ENST00000418130 2042 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 OR56B2P-202ENST00000641377 2453 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFRAP16234 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFRAP16234 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC139713.2-214ENST00000642059 1811 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC017007.4-201ENST00000503353 1352 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 MAPK10-349ENST00000641767 3661 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 RNU1-44P-201ENST00000384453 163 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDGFRAP16234 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 RN7SKP199-201ENST00000410325 305 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 HMGB3P31-201ENST00000413333 595 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.67□□□□□ -1.66
PDGFRAP16234 RPS27AP7-201ENST00000422792 455 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RPS12P5-201ENST00000423449 371 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RWDD4P2-201ENST00000426392 563 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 CDY14P-201ENST00000431260 1014 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 CDY12P-201ENST00000440679 1015 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 ARL4AP3-201ENST00000441452 574 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 ARL5AP2-201ENST00000444698 533 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 CDY13P-201ENST00000445813 1015 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFRAP16234 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 CDY23P-201ENST00000451661 1014 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 VN1R32P-201ENST00000452234 905 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 DDX39BP2-208ENST00000453923 258 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC092905.1-201ENST00000467527 949 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RPL21P126-201ENST00000470049 478 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL161747.1-201ENST00000480068 358 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AC012158.1-204ENST00000483430 465 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RWDD4P1-201ENST00000488019 565 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 DEFB109F-201ENST00000491870 277 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC106806.2-201ENST00000509365 500 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 RNA5SP464-201ENST00000516251 108 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC090151.1-201ENST00000520784 730 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 C1GALT1P3-201ENST00000522049 819 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFRAP16234 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.67□□□□□ -1.66
PDGFRAP16234 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.67□□□□□ -1.66
PDGFRAP16234 CR383656.14-201ENST00000551951 406 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 MTND4LP24-201ENST00000572277 291 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFRAP16234 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 AC010201.1-201ENST00000605051 540 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 MIR378J-201ENST00000611988 109 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 MIR8084-201ENST00000614105 89 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 CR392039.4-201ENST00000624968 501 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AC006065.6-201ENST00000625201 545 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL596275.2-204ENST00000641628 552 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 AL596275.2-206ENST00000641957 626 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 MFSD8-213ENST00000641134 1327 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFRAP16234 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFRAP16234 AL356489.2-201ENST00000566968 3528 ntBASIC4.67□□□□□ -1.66
PDGFRAP16234 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PDGFRAP16234 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.66□□□□□ -1.66
PDGFRAP16234 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFRAP16234 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms