Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC104984.5-201ENST00000586878 94 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.62□□□□□ -1.83
SPTA1P02549 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SPTA1P02549 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.61□□□□□ -1.83
SPTA1P02549 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
SPTA1P02549 RNA5SP151-201ENST00000365632 117 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
SPTA1P02549 AC037198.2-201ENST00000478845 733 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.61□□□□□ -1.83
SPTA1P02549 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.61□□□□□ -1.83
SPTA1P02549 OR2AS2P-201ENST00000606902 342 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 AC005183.1-201ENST00000603687 1979 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 AP000432.2-201ENST00000624164 2048 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 BTBD10P1-201ENST00000549824 1352 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.61□□□□□ -1.83
SPTA1P02549 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SPTA1P02549 ANKRD36P1-201ENST00000344424 659 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 AL139247.1-201ENST00000422768 325 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.61□□□□□ -1.83
SPTA1P02549 AC106707.2-201ENST00000484182 374 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 RN7SL504P-201ENST00000494496 287 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 MYL12BP2-201ENST00000503948 512 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SPTA1P02549 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.61□□□□□ -1.83
SPTA1P02549 AC005034.4-201ENST00000603612 899 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 AC112503.1-201ENST00000608436 391 ntBASIC3.61□□□□□ -1.83
SPTA1P02549 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.61□□□□□ -1.83
SPTA1P02549 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPTA1P02549 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 CDY11P-201ENST00000447168 1651 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 OR56A5-201ENST00000340110 738 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 RNA5SP267-201ENST00000364893 126 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 AC005300.1-201ENST00000428401 373 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 RPS3AP46-201ENST00000448352 682 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.6□□□□□ -1.83
SPTA1P02549 AC027216.1-201ENST00000577726 685 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.6□□□□□ -1.83
SPTA1P02549 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPTA1P02549 AL669831.5-218ENST00000591702 1873 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 ARF4P3-201ENST00000397387 509 ntBASIC3.6□□□□□ -1.83
SPTA1P02549 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.6□□□□□ -1.83
SPTA1P02549 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC3.6□□□□□ -1.83
SPTA1P02549 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.6□□□□□ -1.83
SPTA1P02549 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.59□□□□□ -1.83
SPTA1P02549 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SPTA1P02549 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SPTA1P02549 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SPTA1P02549 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SPTA1P02549 FTLP6-201ENST00000355274 422 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 TAF9BP1-201ENST00000396646 746 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 AC104333.2-201ENST00000422630 192 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 TMED11P-201ENST00000479478 690 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.59□□□□□ -1.83
SPTA1P02549 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.59□□□□□ -1.83
SPTA1P02549 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
SPTA1P02549 AC034105.3-201ENST00000565294 442 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 MIR5187-201ENST00000583479 76 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 MIR7106-201ENST00000612419 65 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SPTA1P02549 AC092435.4-201ENST00000623012 4159 ntBASIC3.59□□□□□ -1.83
SPTA1P02549 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SPTA1P02549 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SPTA1P02549 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SPTA1P02549 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SPTA1P02549 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.59□□□□□ -1.84
SPTA1P02549 RN7SKP167-201ENST00000411047 285 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.59□□□□□ -1.84
SPTA1P02549 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms