Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AC046144.1-201ENST00000478559 1853 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AL590763.1-201ENST00000398297 1545 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AC135352.1-201ENST00000506173 1418 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.35□□□□□ -1.55
CNOT4O95628 RNU6-501P-201ENST00000364072 100 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 RPL31P52-201ENST00000407532 367 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNOT4O95628 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AL096829.1-201ENST00000413677 457 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 AL358176.3-201ENST00000420757 454 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC007562.1-201ENST00000421819 517 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC012498.1-201ENST00000424037 437 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 BRWD1P3-201ENST00000428816 390 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.35□□□□□ -1.55
CNOT4O95628 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AL161636.2-201ENST00000445179 927 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC023274.2-201ENST00000445264 521 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 NFU1P2-201ENST00000448700 469 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 RPL30P9-201ENST00000465586 330 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC105252.1-201ENST00000503089 286 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC002456.2-201ENST00000509356 380 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 RPL7L1P4-201ENST00000513004 707 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.35□□□□□ -1.55
CNOT4O95628 RNU6-507P-201ENST00000516045 100 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 RNA5SP340-201ENST00000517132 107 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 RN7SKP283-201ENST00000517197 270 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 CDC42P3-201ENST00000518493 633 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 OR5BC1P-201ENST00000529327 739 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNOT4O95628 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 CR383656.6-201ENST00000550518 394 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 PSMB7P1-201ENST00000556349 514 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 GTF2IP8-201ENST00000560687 584 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC090651.1-201ENST00000567865 634 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 AC005730.3-201ENST00000583067 366 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 MIR6793-201ENST00000612376 63 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 MTND1P37-201ENST00000636562 264 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 MIR3688-2-201ENST00000636963 87 ntBASIC5.35□□□□□ -1.55
CNOT4O95628 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.35□□□□□ -1.55
CNOT4O95628 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.35□□□□□ -1.55
CNOT4O95628 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.35□□□□□ -1.55
CNOT4O95628 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNOT4O95628 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNOT4O95628 AC134882.1-201ENST00000603738 1676 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
CNOT4O95628 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.34□□□□□ -1.55
CNOT4O95628 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.34□□□□□ -1.55
CNOT4O95628 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNOT4O95628 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CNOT4O95628 AC016583.1-201ENST00000624221 2431 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.34□□□□□ -1.55
CNOT4O95628 AC083843.2-201ENST00000568248 6253 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNOT4O95628 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CNOT4O95628 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CNOT4O95628 RNU5D-1-201ENST00000363299 116 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 RNU4-76P-201ENST00000364509 141 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AC016739.1-201ENST00000405359 345 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 RNU2-42P-201ENST00000410697 113 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AC138393.2-201ENST00000414742 246 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.34□□□□□ -1.55
CNOT4O95628 AC233728.2-201ENST00000425348 757 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.34□□□□□ -1.55
CNOT4O95628 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.34□□□□□ -1.55
CNOT4O95628 RPL7P36-201ENST00000444633 681 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.34□□□□□ -1.55
CNOT4O95628 AL445466.1-201ENST00000448432 357 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AL606490.1-201ENST00000452266 765 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AC010683.1-201ENST00000473673 378 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 AC092989.1-201ENST00000481235 277 ntBASIC5.34□□□□□ -1.55
CNOT4O95628 RPL7P24-201ENST00000493052 752 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms