Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPL31P52-201ENST00000407532 367 ntBASIC4.09□□□□□ -1.75
HCN1O60741 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.09□□□□□ -1.75
HCN1O60741 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN1O60741 RN7SKP167-201ENST00000411047 285 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.09□□□□□ -1.75
HCN1O60741 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 RPS12P10-201ENST00000427031 377 ntBASIC4.09□□□□□ -1.75
HCN1O60741 NPM1P24-201ENST00000428039 894 ntBASIC4.09□□□□□ -1.75
HCN1O60741 CDY14P-201ENST00000431260 1014 ntBASIC4.09□□□□□ -1.75
HCN1O60741 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN1O60741 CDY12P-201ENST00000440679 1015 ntBASIC4.09□□□□□ -1.75
HCN1O60741 CDY13P-201ENST00000445813 1015 ntBASIC4.09□□□□□ -1.75
HCN1O60741 CDY23P-201ENST00000451661 1014 ntBASIC4.09□□□□□ -1.75
HCN1O60741 DDX39BP2-208ENST00000453923 258 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC005229.2-201ENST00000456995 399 ntBASIC4.09□□□□□ -1.75
HCN1O60741 RPL21P126-201ENST00000470049 478 ntBASIC4.09□□□□□ -1.75
HCN1O60741 HMGB1P3-201ENST00000502802 616 ntBASIC4.09□□□□□ -1.75
HCN1O60741 PRELID3BP5-201ENST00000508612 460 ntBASIC4.09□□□□□ -1.75
HCN1O60741 PARP4P3-201ENST00000510265 317 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.09□□□□□ -1.75
HCN1O60741 RN7SKP122-201ENST00000515923 296 ntBASIC4.09□□□□□ -1.75
HCN1O60741 RNU6-1308P-201ENST00000516817 103 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HCN1O60741 OR5M7P-201ENST00000526140 972 ntBASIC4.09□□□□□ -1.75
HCN1O60741 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HCN1O60741 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 AC068831.4-201ENST00000556118 109 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN1O60741 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
HCN1O60741 AC068790.5-201ENST00000602741 355 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC010201.1-201ENST00000605051 540 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC012467.1-201ENST00000607740 256 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AL445423.1-201ENST00000609941 536 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
HCN1O60741 AC003001.2-201ENST00000616294 831 ntBASIC4.09□□□□□ -1.75
HCN1O60741 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HCN1O60741 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN1O60741 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.09□□□□□ -1.75
HCN1O60741 AC009452.1-201ENST00000640823 606 ntBASIC4.09□□□□□ -1.75
HCN1O60741 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.09□□□□□ -1.75
HCN1O60741 LINC00622-201ENST00000562811 1570 ntBASIC4.09□□□□□ -1.75
HCN1O60741 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HCN1O60741 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
HCN1O60741 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
HCN1O60741 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HCN1O60741 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.09□□□□□ -1.76
HCN1O60741 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
HCN1O60741 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
HCN1O60741 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HCN1O60741 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.09□□□□□ -1.76
HCN1O60741 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
HCN1O60741 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN1O60741 AC068538.1-201ENST00000376856 336 ntBASIC4.08□□□□□ -1.76
HCN1O60741 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HCN1O60741 RNU6-532P-201ENST00000384318 107 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AL603766.1-201ENST00000407763 664 ntBASIC4.08□□□□□ -1.76
HCN1O60741 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 CHIAP3-201ENST00000423668 1133 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AC073335.1-201ENST00000427776 363 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.08□□□□□ -1.76
HCN1O60741 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.08□□□□□ -1.76
HCN1O60741 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN1O60741 PNPT1P2-201ENST00000456768 2050 ntBASIC4.08□□□□□ -1.76
HCN1O60741 OR52A4P-202ENST00000481634 799 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AC011037.1-201ENST00000483964 558 ntBASIC4.08□□□□□ -1.76
HCN1O60741 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.08□□□□□ -1.76
HCN1O60741 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCN1O60741 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.08□□□□□ -1.76
HCN1O60741 AC025674.1-201ENST00000507074 324 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN1O60741 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN1O60741 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 VN1R84P-201ENST00000593697 235 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AP001160.4-201ENST00000596971 382 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AC090181.2-201ENST00000602975 672 ntBASIC4.08□□□□□ -1.76
HCN1O60741 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.08□□□□□ -1.76
HCN1O60741 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 AC104307.1-201ENST00000616142 196 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AL121890.3-201ENST00000618494 516 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AL162233.1-201ENST00000620014 944 ntBASIC4.08□□□□□ -1.76
HCN1O60741 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
HCN1O60741 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.08□□□□□ -1.76
HCN1O60741 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HCN1O60741 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 CPHL1P-201ENST00000461341 3407 ntBASIC4.08□□□□□ -1.76
HCN1O60741 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.08□□□□□ -1.76
HCN1O60741 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HCN1O60741 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HCN1O60741 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
HCN1O60741 IQCB2P-201ENST00000401788 1633 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms