Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 GYG1P1-201ENST00000460864 698 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC048346.1-201ENST00000510247 144 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 BTF3P13-201ENST00000513224 490 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.65□□□□□ -1.5
PRPF3O43395 AP001207.1-201ENST00000524051 481 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 OR4A2P-201ENST00000527276 913 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC018552.3-201ENST00000567416 561 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC017100.2-201ENST00000584628 355 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 ELOCP35-201ENST00000604289 336 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC007497.1-201ENST00000610421 561 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC097478.2-201ENST00000610572 514 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC079395.3-201ENST00000615161 484 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC009318.3-201ENST00000616916 503 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC243756.2-201ENST00000618406 463 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PRPF3O43395 AC025574.1-201ENST00000554784 1653 ntBASIC5.65□□□□□ -1.51
PRPF3O43395 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.65□□□□□ -1.51
PRPF3O43395 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRPF3O43395 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRPF3O43395 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PRPF3O43395 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRPF3O43395 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 THAP12P5-201ENST00000405864 2275 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PRPF3O43395 AL049545.1-201ENST00000401856 572 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC007559.1-201ENST00000428736 355 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 GTF3AP5-201ENST00000442645 697 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC011979.1-201ENST00000472300 483 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 OR52A4P-201ENST00000472867 958 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 DYNLL1P6-201ENST00000503440 264 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF3O43395 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.64□□□□□ -1.51
PRPF3O43395 AL049839.1-201ENST00000556151 657 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC022069.1-201ENST00000582910 658 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC015688.2-201ENST00000584523 262 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 BNIP3P26-201ENST00000600827 554 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 AC090510.2-201ENST00000617465 629 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AL512506.2-201ENST00000624472 458 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC026523.2-201ENST00000625039 7739 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 AC007529.1-201ENST00000418574 2178 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 IRF5P1-201ENST00000504852 2164 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.64□□□□□ -1.51
PRPF3O43395 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PRPF3O43395 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 MTND4P8-201ENST00000514997 1362 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF3O43395 AC025125.1-201ENST00000624743 1922 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 Z99496.1-201ENST00000469424 1477 ntBASIC5.64□□□□□ -1.51
PRPF3O43395 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF3O43395 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PRPF3O43395 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PRPF3O43395 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.63□□□□□ -1.51
PRPF3O43395 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PRPF3O43395 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF3O43395 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PRPF3O43395 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.63□□□□□ -1.51
PRPF3O43395 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.63□□□□□ -1.51
PRPF3O43395 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF3O43395 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PRPF3O43395 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF3O43395 RNU5A-2P-201ENST00000384337 116 ntBASIC5.63□□□□□ -1.51
PRPF3O43395 RNU6-146P-201ENST00000384602 108 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms