Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK2O43353 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK2O43353 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK2O43353 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK2O43353 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 SNX5P1-201ENST00000505757 1041 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 AC110792.2-201ENST00000510278 224 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 IGHV3-32-201ENST00000519182 355 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 HMGB1P46-201ENST00000520062 610 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK2O43353 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK2O43353 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
RIPK2O43353 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 HMGN2P6-201ENST00000551091 273 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 UBE2FP2-201ENST00000566646 462 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.32□□□□□ -1.72
RIPK2O43353 AC006946.3-201ENST00000609791 756 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 AC095038.2-201ENST00000621464 1070 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 AC008013.2-202ENST00000637965 364 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 MIR4302-201ENST00000638058 60 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK2O43353 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RIPK2O43353 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK2O43353 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK2O43353 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIPK2O43353 AC008725.1-201ENST00000605123 2263 ntBASIC4.32□□□□□ -1.72
RIPK2O43353 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 DCAF13P1-201ENST00000495256 1330 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RIPK2O43353 FAM3C2-201ENST00000312214 681 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RIPK2O43353 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 SNORA27.3-201ENST00000364937 134 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK2O43353 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RIPK2O43353 Z86062.1-201ENST00000406773 777 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 MIR1179-201ENST00000408703 91 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 RPL23AP27-201ENST00000415161 451 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 VDAC1P6-201ENST00000430062 855 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK2O43353 AL132765.1-201ENST00000434165 553 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 PSMD10P3-201ENST00000437000 448 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 RPL12P11-201ENST00000439970 501 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 TPTE2P6-202ENST00000445572 1007 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 PPIAP3-201ENST00000450588 505 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 RN7SL808P-201ENST00000496066 299 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK2O43353 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC063950.1-201ENST00000552036 308 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 RNA5SP108-201ENST00000605921 117 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 AL359715.5-201ENST00000623431 443 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 CDRT1-208ENST00000630868 794 ntBASIC4.31□□□□□ -1.72
RIPK2O43353 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.31□□□□□ -1.72
RIPK2O43353 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIPK2O43353 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RIPK2O43353 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 AC017007.4-201ENST00000503353 1352 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK2O43353 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
RIPK2O43353 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 AL049697.2-201ENST00000403708 294 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 ZNF603P-201ENST00000405613 487 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 AC244453.4-201ENST00000419150 388 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms