Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR372-201ENST00000362225 67 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PPIAP31-201ENST00000405422 495 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL21P65-201ENST00000406094 466 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SKP33-201ENST00000410942 340 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PGBD4P8-201ENST00000412993 562 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL356095.1-201ENST00000417217 199 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC122718.1-201ENST00000439448 744 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL357520.1-201ENST00000441557 453 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 HMGB3P22-202ENST00000451823 572 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL38P1-201ENST00000460914 211 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 FAM133DP-201ENST00000464802 691 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 KCTD9P6-201ENST00000522306 950 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC022655.2-201ENST00000577280 318 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 QTRT1P1-201ENST00000604344 1078 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 BMS1P21-201ENST00000634565 365 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RLIMP1-201ENST00000339626 1680 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MARK2P15-201ENST00000432204 2186 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RNU11-4P-201ENST00000391149 133 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL603766.1-201ENST00000407763 664 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC013268.2-201ENST00000420753 337 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MTCO1P54-201ENST00000430139 712 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SERPINA7P1-201ENST00000443077 631 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL359073.1-201ENST00000448036 403 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL5P32-201ENST00000454085 879 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC008126.1-201ENST00000549019 480 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL360157.1-201ENST00000565962 87 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC007599.1-201ENST00000568688 1174 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 HMGB1P50-201ENST00000605814 607 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AP003392.5-201ENST00000607857 415 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR6875-201ENST00000617506 72 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC095038.2-201ENST00000621464 1070 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC015722.2-201ENST00000622210 551 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL773545.4-201ENST00000637262 310 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL513478.4-201ENST00000641636 310 ntBASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 BDP1P-201ENST00000582658 1990 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SKP202-201ENST00000410439 330 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CASKP1-201ENST00000412870 582 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL7P4-203ENST00000430239 730 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC087650.1-201ENST00000431445 468 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC011742.1-201ENST00000431448 434 ntBASIC3.24□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms