Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL391497.1-201ENST00000608671 547 ntBASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 SAMMSON-213ENST00000641336 1521 ntBASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 SNORA3C-201ENST00000408792 125 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AL390879.2-203ENST00000426943 1121 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC021146.3-201ENST00000511911 260 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 RN7SKP289-201ENST00000517244 295 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC090136.1-201ENST00000520009 240 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 MIR3922-201ENST00000585192 84 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC068020.1-201ENST00000594215 661 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 LSM1P2-201ENST00000604911 322 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 RNU1-30P-201ENST00000606575 163 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC055839.1-201ENST00000634467 498 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 AC005261.6-201ENST00000623072 1387 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 MUC2-202ENST00000613187 4845 ntBASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK2Q9UPX8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 MIR1251-201ENST00000408552 70 ntBASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 PRO1804-201ENST00000623780 2050 ntBASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 ATP5A1P2-201ENST00000412323 255 ntBASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 FTH1P11-201ENST00000517577 551 ntBASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHANK2Q9UPX8 AC058791.1-201ENST00000608412 3198 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 Y_RNA.500-201ENST00000384466 111 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 ZNF602P-201ENST00000405929 924 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 HDGFP1-201ENST00000405943 252 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 CDH12P2-201ENST00000504393 298 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 HSPD1P15-201ENST00000505573 1122 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 MIR6852-201ENST00000621699 66 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AL773545.4-201ENST00000637262 310 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 AL513478.4-201ENST00000641636 310 ntBASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK2Q9UPX8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 IL6STP1-201ENST00000346911 1020 ntBASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 HMGB1P37-201ENST00000439613 609 ntBASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 BX510359.1-201ENST00000456973 237 ntBASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 RN7SKP57-201ENST00000517248 293 ntBASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK2Q9UPX8 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms