Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 MIR6779-201ENST00000617283 64 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC018692.3-201ENST00000623929 123 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC025048.6-202ENST00000627667 438 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RNA5SP307-201ENST00000362863 116 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 MIR518E-201ENST00000385252 88 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC117434.1-201ENST00000419971 836 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL109933.2-201ENST00000452651 260 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC016727.1-205ENST00000605437 569 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 Xist_exon4.1-201ENST00000615964 126 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC092184.1-201ENST00000625042 715 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC119674.1-207ENST00000641355 633 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 OR13C3-201ENST00000374781 1108 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC093698.1-201ENST00000423843 571 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL645931.1-201ENST00000439737 410 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PRELID3BP3-201ENST00000584963 545 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 NEAT1-202ENST00000501122 22743 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL672167.1-206ENST00000356293 943 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RAP1BP1-201ENST00000412709 553 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 HMGN1P33-201ENST00000432945 451 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC016772.1-201ENST00000444170 1261 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RN7SL863P-201ENST00000462370 296 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 NDUFA5P2-201ENST00000519723 344 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC091167.4-201ENST00000605079 184 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC100778.3-201ENST00000580060 1750 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RNU1-63P-201ENST00000383902 164 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL031679.1-201ENST00000400616 525 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 BX119904.3-201ENST00000428194 957 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RBMY2UP-201ENST00000453474 324 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RPL23AP11-201ENST00000475260 469 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 Z98200.1-201ENST00000607298 470 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL162574.1-201ENST00000615702 950 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 MALAT1-202ENST00000534336 8708 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms