Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX6Q9UPM6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX6Q9UPM6 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC117382.2-201ENST00000564748 3151 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNA5SP258-201ENST00000362750 119 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNY1P16-201ENST00000363063 111 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 Y_RNA.398-201ENST00000383952 99 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNU6-393P-201ENST00000384475 107 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNA5SP177-201ENST00000410122 107 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RN7SKP148-201ENST00000410179 275 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 HMGN1P24-201ENST00000412282 298 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL603650.1-201ENST00000412680 240 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 SYF2P2-201ENST00000417620 583 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 GAPDHP48-201ENST00000436626 961 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL031681.1-201ENST00000443304 400 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RAC1P7-201ENST00000445367 377 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 COX6CP14-201ENST00000469580 174 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC084198.1-201ENST00000477747 402 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RN7SL655P-201ENST00000486087 298 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RN7SL214P-201ENST00000487317 265 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC016559.2-201ENST00000510759 359 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RNU6-685P-201ENST00000517088 95 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AP004833.3-201ENST00000531893 322 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC138749.2-201ENST00000566048 167 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC024267.2-201ENST00000582737 417 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC061975.3-201ENST00000583209 244 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 PSMA6P4-201ENST00000603247 718 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC006335.3-201ENST00000613408 292 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 MIR6729-201ENST00000618194 65 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC211486.4-201ENST00000621495 113 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC024580.1-201ENST00000623020 674 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC073488.7-201ENST00000633785 778 ntBASIC7.24□□□□□ -1.25
LHX6Q9UPM6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX6Q9UPM6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 TRIM51GP-201ENST00000534741 1350 ntBASIC7.23□□□□□ -1.25
LHX6Q9UPM6 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 SMG1P1-202ENST00000309865 4223 ntBASIC7.23□□□□□ -1.25
LHX6Q9UPM6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX6Q9UPM6 RNU6-188P-201ENST00000364207 107 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms