Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL20A1Q9P218 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC006042.3-201ENST00000454684 1469 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 NACA3P-201ENST00000359690 648 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 SNORD113.2-201ENST00000364166 89 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 ARL4AP5-201ENST00000404372 599 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 DPPA2P2-201ENST00000418220 897 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 RPL23AP1-201ENST00000428990 471 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC016712.1-201ENST00000431088 378 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 RPL7P34-201ENST00000433316 712 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 HMGB1P45-201ENST00000435986 653 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 RPS7P5-201ENST00000441482 581 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 RPS26P30-201ENST00000443431 335 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 MRPL35P4-201ENST00000453682 566 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC098799.3-201ENST00000506095 438 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC118282.2-201ENST00000508739 374 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC010285.3-201ENST00000511668 676 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 RNU1-6P-201ENST00000516290 144 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC023632.1-201ENST00000518463 375 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AP000859.1-201ENST00000525536 307 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC006349.1-201ENST00000555526 235 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 NIFKP8-201ENST00000560500 874 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 MIR5096-201ENST00000583713 70 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC091057.2-201ENST00000602594 792 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 Z95327.3-201ENST00000610385 572 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC024257.5-201ENST00000612739 531 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC091304.6-201ENST00000619761 202 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 GVINP1-202ENST00000531871 7271 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.41□□□□□ -1.54
COL20A1Q9P218 AC093775.1-201ENST00000624154 1868 ntBASIC5.41□□□□□ -1.54
COL20A1Q9P218 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL20A1Q9P218 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL20A1Q9P218 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL20A1Q9P218 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL20A1Q9P218 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL20A1Q9P218 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL20A1Q9P218 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 SNORA51.12-201ENST00000384448 134 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC114814.2-201ENST00000419195 485 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 RPEP3-201ENST00000425462 676 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC073069.1-201ENST00000428657 441 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 RPL35AP21-201ENST00000437667 333 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 TPTE2P6-202ENST00000445572 1007 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 MTND2P14-201ENST00000482139 351 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC012123.2-201ENST00000485809 248 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 CEACAMP10-202ENST00000495431 496 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.4□□□□□ -1.54
COL20A1Q9P218 RN7SKP92-201ENST00000517266 244 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 HMGB1P23-201ENST00000518743 568 ntBASIC5.4□□□□□ -1.54
COL20A1Q9P218 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms