Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC092079.1-201ENST00000558620 1985 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 RNA5SP183-201ENST00000362452 119 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RNU6-560P-201ENST00000364007 108 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 MIR16-1-201ENST00000385271 89 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RNA5SP339-201ENST00000390987 122 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RPL35AP24-201ENST00000413846 330 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RPL6P29-201ENST00000414863 865 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 SLC35E1P1-201ENST00000419313 864 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC007435.1-201ENST00000421086 415 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 FAM96AP1-201ENST00000430879 482 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RPL7L1P9-201ENST00000431298 745 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC005345.1-201ENST00000431868 217 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 GSTA7P-201ENST00000438425 448 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 CBX1P4-201ENST00000439415 457 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RPS7P5-201ENST00000441482 581 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 TCEA1P3-201ENST00000443005 880 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RPL21P134-201ENST00000453468 483 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC005229.2-201ENST00000456995 399 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL133477.1-201ENST00000457472 514 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC021660.1-201ENST00000465006 554 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 RN7SL727P-201ENST00000482164 296 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 COX6B1P2-201ENST00000489624 230 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 DYNLL1P6-201ENST00000503440 264 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC006499.3-201ENST00000506077 748 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 IGBP1P5-201ENST00000507524 1000 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC116353.3-201ENST00000511215 249 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC012400.1-201ENST00000518452 381 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL049779.2-201ENST00000553847 315 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 HIGD1AP17-201ENST00000554576 276 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC004825.1-201ENST00000555068 586 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL031281.1-201ENST00000604049 488 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC121247.2-201ENST00000604776 136 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL158042.1-201ENST00000605338 460 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC090948.2-201ENST00000607363 564 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 VIS1.1-201ENST00000610517 203 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC009090.3-201ENST00000616553 565 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC016769.4-201ENST00000616893 535 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC118658.2-201ENST00000618697 459 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AL603755.1-201ENST00000619504 163 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AC022509.4-201ENST00000621404 572 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AP000776.1-201ENST00000530032 1663 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 C4BPAP1-201ENST00000415474 1893 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 SGO1P1-201ENST00000603525 1447 ntBASIC4.79□□□□□ -1.64
TRIM2Q9C040 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM2Q9C040 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM2Q9C040 AP000526.1-201ENST00000603308 1388 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 PHKBP1-201ENST00000450951 1951 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 AC092747.4-201ENST00000620519 1861 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 Y_RNA.318-201ENST00000365131 97 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM2Q9C040 SPTLC1P2-201ENST00000407089 121 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM2Q9C040 RNA5SP80-201ENST00000410475 111 ntBASIC4.78□□□□□ -1.64
TRIM2Q9C040 RNU2-6P-201ENST00000411404 190 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms