Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TRIM51GP-201ENST00000534741 1350 ntBASIC5.27□□□□□ -1.57
SMOQ99835 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMOQ99835 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SMOQ99835 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.26□□□□□ -1.57
SMOQ99835 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.26□□□□□ -1.57
SMOQ99835 ECM1P2-201ENST00000503354 1577 ntBASIC5.26□□□□□ -1.57
SMOQ99835 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMOQ99835 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SMOQ99835 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 Z97832.1-201ENST00000402490 328 ntBASIC5.26□□□□□ -1.57
SMOQ99835 NRBF2P2-201ENST00000413087 861 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AL031779.1-201ENST00000415663 330 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC114814.2-201ENST00000419195 485 ntBASIC5.26□□□□□ -1.57
SMOQ99835 GAPDHP49-201ENST00000421421 961 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC019178.2-201ENST00000423595 505 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 AC010153.1-201ENST00000432862 727 ntBASIC5.26□□□□□ -1.57
SMOQ99835 KCTD10P1-201ENST00000434203 625 ntBASIC5.26□□□□□ -1.57
SMOQ99835 MTCO2P16-201ENST00000436962 677 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 AL691482.1-201ENST00000453255 87 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 RPS17P2-201ENST00000461663 408 ntBASIC5.26□□□□□ -1.57
SMOQ99835 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 GAPDHP36-201ENST00000480688 918 ntBASIC5.26□□□□□ -1.57
SMOQ99835 GAPDHP39-201ENST00000481866 979 ntBASIC5.26□□□□□ -1.57
SMOQ99835 RN7SL591P-201ENST00000496150 292 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.26□□□□□ -1.57
SMOQ99835 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 HMGB1P23-201ENST00000518743 568 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.26□□□□□ -1.57
SMOQ99835 AC021006.3-201ENST00000530771 192 ntBASIC5.26□□□□□ -1.57
SMOQ99835 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AC023161.2-201ENST00000551218 780 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.26□□□□□ -1.57
SMOQ99835 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.26□□□□□ -1.57
SMOQ99835 AC011487.3-201ENST00000593607 453 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC119751.7-201ENST00000600494 245 ntBASIC5.26□□□□□ -1.57
SMOQ99835 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC087783.2-201ENST00000605070 562 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AL451074.6-201ENST00000608512 729 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC121761.2-201ENST00000617300 689 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC026585.1-201ENST00000619582 524 ntBASIC5.26□□□□□ -1.57
SMOQ99835 Z69908.1-201ENST00000622603 247 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC006840.1-201ENST00000623069 542 ntBASIC5.26□□□□□ -1.57
SMOQ99835 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SMOQ99835 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMOQ99835 MAPK10-338ENST00000641647 3362 ntBASIC5.26□□□□□ -1.57
SMOQ99835 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMOQ99835 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMOQ99835 AC004817.4-201ENST00000602396 3625 ntBASIC5.26□□□□□ -1.57
SMOQ99835 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMOQ99835 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.26□□□□□ -1.57
SMOQ99835 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.25□□□□□ -1.57
SMOQ99835 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMOQ99835 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SMOQ99835 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.25□□□□□ -1.57
SMOQ99835 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.25□□□□□ -1.57
SMOQ99835 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SMOQ99835 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.25□□□□□ -1.57
SMOQ99835 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMOQ99835 IL6STP1-201ENST00000346911 1020 ntBASIC5.25□□□□□ -1.57
SMOQ99835 IGKV7-3-201ENST00000357453 298 ntBASIC5.25□□□□□ -1.57
SMOQ99835 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SMOQ99835 SNORA5.1-201ENST00000384275 131 ntBASIC5.25□□□□□ -1.57
SMOQ99835 MIR137-201ENST00000385223 102 ntBASIC5.25□□□□□ -1.57
SMOQ99835 RNA5SP80-201ENST00000410475 111 ntBASIC5.25□□□□□ -1.57
SMOQ99835 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.25□□□□□ -1.57
SMOQ99835 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.25□□□□□ -1.57
SMOQ99835 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.25□□□□□ -1.57
SMOQ99835 AL009174.1-201ENST00000426577 416 ntBASIC5.25□□□□□ -1.57
SMOQ99835 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMOQ99835 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.25□□□□□ -1.57
SMOQ99835 AC112498.1-201ENST00000444401 332 ntBASIC5.25□□□□□ -1.57
SMOQ99835 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms