Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PPIAP20-201ENST00000449839 135 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL935212.3-201ENST00000450729 284 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC097262.1-201ENST00000452559 548 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 GAPDHP36-201ENST00000480688 918 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RPL7P51-201ENST00000490532 749 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC104090.1-201ENST00000506341 1171 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RNU6-416P-201ENST00000516265 103 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RNU6-759P-201ENST00000516740 103 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AP001317.1-201ENST00000531194 960 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL590229.1-201ENST00000603497 542 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL163642.2-201ENST00000604722 1019 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC096553.1-201ENST00000605169 829 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC126915.2-201ENST00000610957 190 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 HULC.1-201ENST00000612720 240 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC121761.2-201ENST00000617300 689 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 MTND4P31-201ENST00000425607 1343 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 ECM1P2-201ENST00000503354 1577 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 CASC19-284ENST00000642142 1868 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MIR323A-201ENST00000362199 86 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 RNU6-553P-201ENST00000364047 96 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 SNORA66-201ENST00000384792 133 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL357515.1-201ENST00000402967 542 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MIR1271-201ENST00000408537 86 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 GAPDHP49-201ENST00000421421 961 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 EIF4HP2-201ENST00000424380 563 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MGAT2P2-201ENST00000427194 797 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL035407.1-201ENST00000429211 571 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MTCYBP3-201ENST00000445588 1137 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 FAR2P1-206ENST00000449736 709 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 SYPL1P1-201ENST00000473622 768 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 RPS21P4-201ENST00000487122 248 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MTCYBP16-201ENST00000509187 1129 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 RNA5SP43-201ENST00000516559 110 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 IGKV2-18-201ENST00000522607 343 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 EIF4A2P5-201ENST00000529914 499 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC012146.2-201ENST00000576545 416 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 MIR6862-1-201ENST00000613016 70 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL627230.1-201ENST00000613077 211 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC122133.1-201ENST00000613964 233 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms