Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DDX43P2-201ENST00000604753 1354 ntBASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 AL079343.1-201ENST00000572358 1771 ntBASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
SYNPOQ8N3V7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RNU6-146P-201ENST00000384602 108 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 Y_RNA.559-201ENST00000384686 107 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 MIR649-201ENST00000384843 97 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL390774.1-201ENST00000411924 246 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RPL35AP24-201ENST00000413846 330 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL953862.1-201ENST00000423016 168 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC023347.2-201ENST00000433994 462 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 CYCSP6-201ENST00000434498 302 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL772161.1-201ENST00000439130 476 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RPL12P3-201ENST00000440080 396 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 MTCO3P2-201ENST00000457365 171 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RNU6-956P-201ENST00000458868 103 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 MEMO1P3-201ENST00000459811 302 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC116337.2-201ENST00000477662 156 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC090013.1-201ENST00000485147 480 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC105384.2-201ENST00000508433 640 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC018797.3-201ENST00000513388 1241 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 RNU6-941P-201ENST00000516346 108 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 OR5D15P-201ENST00000531671 942 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 GTF2IP22-201ENST00000554443 182 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC107214.2-201ENST00000608204 634 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AP000254.1-201ENST00000609934 520 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC008121.2-201ENST00000614647 523 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 MIR7844-201ENST00000616161 122 ntBASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNPOQ8N3V7 AC097063.1-201ENST00000426714 1797 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 MTND4P16-201ENST00000466108 1367 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 RN7SKP6-201ENST00000364795 319 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 RNU6-723P-201ENST00000383973 107 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 RNU6-178P-201ENST00000384631 104 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 Y_RNA.553-201ENST00000384670 102 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 MIR550A3-201ENST00000390735 95 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 AL121972.1-201ENST00000402023 252 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 AL645733.1-201ENST00000402250 217 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 AL023807.1-201ENST00000407932 359 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 PGBD4P8-201ENST00000412993 562 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 AC083875.1-201ENST00000419509 405 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 LINC00993-201ENST00000420453 540 ntBASIC5.72□□□□□ -1.49
SYNPOQ8N3V7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms