Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC079610.2-201ENST00000604818 690 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC131159.1-201ENST00000621854 213 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 U3.53-201ENST00000628922 216 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC097063.1-201ENST00000426714 1797 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 AL359715.4-201ENST00000606629 1436 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 MTND4P34-201ENST00000572715 1371 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 Y_RNA.51-201ENST00000362725 102 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 RNU6-1005P-201ENST00000384519 107 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 RPL32P23-201ENST00000397237 405 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 TAF9BP2-201ENST00000400856 499 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 NPM1P37-201ENST00000403105 874 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 MTCO1P21-201ENST00000416634 589 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 RPL7P57-201ENST00000423238 740 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AL158073.1-201ENST00000426848 1104 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 BX119904.1-201ENST00000432026 348 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AL445567.1-201ENST00000439121 144 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 FHP1-201ENST00000442741 703 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 USP9YP25-201ENST00000457708 443 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 CYCSP34-201ENST00000458172 304 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC092691.2-201ENST00000461787 803 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 RPL21P126-201ENST00000470049 478 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 RPS27AP16-201ENST00000492222 470 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC023424.1-201ENST00000496058 459 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 MTCYBP37-201ENST00000510642 1133 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 RFPL4AP3-201ENST00000515267 345 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 RPL23AP53-201ENST00000521854 457 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AP003461.1-201ENST00000528866 78 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 LRRC6P1-201ENST00000532188 885 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 AP000916.1-201ENST00000533869 835 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC025918.2-201ENST00000558683 763 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 AC068790.6-201ENST00000602558 258 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 MRPS35P3-201ENST00000603189 709 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 Z95327.3-201ENST00000610385 572 ntBASIC5.84□□□□□ -1.47
SYNE4Q8N205 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE4Q8N205 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE4Q8N205 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
SYNE4Q8N205 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE4Q8N205 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE4Q8N205 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE4Q8N205 Y_RNA.201-201ENST00000364052 96 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 AL008987.1-201ENST00000415528 237 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 LINC01881-201ENST00000416103 412 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 SETP9-201ENST00000423837 832 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 PRELID3BP10-201ENST00000431957 584 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 ARL4AP3-201ENST00000441452 574 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 H2AFZP5-201ENST00000446960 382 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 AL359073.1-201ENST00000448036 403 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 RPL23AP24-201ENST00000458203 385 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE4Q8N205 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE4Q8N205 AC091167.1-201ENST00000492017 396 ntBASIC5.83□□□□□ -1.48
SYNE4Q8N205 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms