Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SNORA51.12-201ENST00000384448 134 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL359643.1-201ENST00000404109 423 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 VN1R37P-201ENST00000419096 748 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CKS1BP6-201ENST00000424932 240 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL451139.1-201ENST00000434718 346 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 RPS7P2-201ENST00000435134 607 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 RPS3AP53-201ENST00000454716 778 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AURKAPS2-201ENST00000454983 333 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CYCSP34-201ENST00000458172 304 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 SNORD108-201ENST00000459332 71 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL591473.1-201ENST00000464297 313 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 RPS20P21-201ENST00000466859 343 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC073358.1-201ENST00000505671 684 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 MORF4L1P3-201ENST00000525966 950 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC005868.1-201ENST00000536421 331 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CENPUP2-201ENST00000555897 1186 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC008507.2-201ENST00000588402 1176 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC125494.3-201ENST00000602759 455 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL121932.1-201ENST00000605542 214 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL391834.2-201ENST00000609982 546 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC096586.1-201ENST00000610267 561 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL049539.1-201ENST00000611964 459 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC087385.3-201ENST00000620477 187 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC015804.1-201ENST00000622935 435 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 U6.107-201ENST00000637108 79 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 SAMMSON-226ENST00000642089 1582 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 CASC19-206ENST00000641028 1430 ntBASIC4.46□□□□□ -1.69
NUP54Q7Z3B4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NUP54Q7Z3B4 A2MP1-204ENST00000566278 4130 ntBASIC4.46□□□□□ -1.69
NUP54Q7Z3B4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 ENSAP3-201ENST00000312710 333 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RNU6-543P-201ENST00000362576 108 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 EIF4HP2-201ENST00000424380 563 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC115285.1-201ENST00000424879 736 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC104837.2-201ENST00000427236 424 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RPS6P12-201ENST00000432491 726 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RPS26P40-201ENST00000435209 294 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 HMGB1P48-201ENST00000446155 598 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 OR1H1P-201ENST00000448731 937 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC091685.2-201ENST00000454924 864 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RPS5P7-201ENST00000456664 608 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC104689.1-201ENST00000473356 768 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RN7SL558P-201ENST00000497468 299 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC093801.2-201ENST00000503966 1050 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RN7SKP46-201ENST00000515942 234 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 RNA5SP392-201ENST00000516905 112 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC083923.1-201ENST00000523708 376 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC011611.5-201ENST00000552477 578 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AL049839.1-201ENST00000556151 657 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 ATP5F1P7-201ENST00000567330 760 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 AC090666.1-201ENST00000578241 445 ntBASIC4.46□□□□□ -1.7
NUP54Q7Z3B4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms