Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC027176.2-201ENST00000559166 746 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 BDH2P1-201ENST00000602288 736 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC138907.10-201ENST00000623708 983 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ZNF812P-201ENST00000457674 1694 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 LINC01109-201ENST00000603837 3081 ntBASIC3.83□□□□□ -1.8
RIF1Q5UIP0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RIF1Q5UIP0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RNA5SP399-201ENST00000364003 117 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 MTND2P40-201ENST00000436718 841 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RN7SKP67-201ENST00000515905 235 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 HMGB2P1-201ENST00000591146 634 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC130352.1-201ENST00000602979 661 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC008966.2-201ENST00000606157 453 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC005326.1-201ENST00000429197 123 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AL049874.2-201ENST00000492636 288 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RNA5SP303-201ENST00000516192 130 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AL157394.1-201ENST00000562983 1224 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC010201.1-201ENST00000605051 540 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC073530.2-201ENST00000623987 261 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 AC087190.4-201ENST00000574616 8334 ntBASIC3.82□□□□□ -1.8
RIF1Q5UIP0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RIF1Q5UIP0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 OOSP1P1-201ENST00000423265 274 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RNF19BPX-201ENST00000426224 625 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RPS4XP4-201ENST00000443195 763 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC021660.1-201ENST00000465006 554 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SETP14-201ENST00000497538 873 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC093755.1-201ENST00000512950 1023 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 CR383656.14-201ENST00000551951 406 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC005034.4-201ENST00000603612 899 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 PCAT14-202ENST00000627127 3935 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 NANOGNBP1-201ENST00000448444 480 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC073387.1-201ENST00000453261 709 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RBMY2UP-201ENST00000453474 324 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SNORD105B-201ENST00000458770 79 ntBASIC3.81□□□□□ -1.8
RIF1Q5UIP0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.81□□□□□ -1.8
RIF1Q5UIP0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 SNORD66.1-201ENST00000391230 76 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 PEX12P1-201ENST00000400284 1048 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 COTL1P1-201ENST00000422309 375 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 RPS15AP29-201ENST00000445539 400 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 RHEBP2-201ENST00000450289 600 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 SNX6P1-201ENST00000601728 1224 ntBASIC3.8□□□□□ -1.8
RIF1Q5UIP0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RIF1Q5UIP0 RNU1-44P-201ENST00000384453 163 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms