Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RUNDC3AQ59EK9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 PANDAR-201ENST00000629595 1506 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 DHX9P1-201ENST00000436565 3076 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AL445437.1-201ENST00000623157 3087 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 SNORD113-6-201ENST00000363345 75 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RNU6-1214P-201ENST00000363650 109 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 Y_RNA.192-201ENST00000363977 102 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RN7SKP269-201ENST00000365545 319 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ATP5F1P2-201ENST00000398143 760 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 NCSTNP1-201ENST00000406229 144 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 SNORA77-201ENST00000408716 125 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 GTF2IP23-201ENST00000423746 351 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RPL7P44-201ENST00000424827 742 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 CKS1BP6-201ENST00000424932 240 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 DPRXP1-201ENST00000426312 460 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC073143.1-201ENST00000436316 395 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC073587.1-201ENST00000447093 876 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AL645937.3-201ENST00000453647 936 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 VPS26AP1-201ENST00000483197 979 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RN7SL466P-201ENST00000497546 295 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 FABP5P12-201ENST00000515543 389 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RN7SKP46-201ENST00000515942 234 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RNA5SP135-201ENST00000517019 125 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ZNF321P-202ENST00000550843 495 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 MRPS36P5-201ENST00000551909 298 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC012146.2-201ENST00000576545 416 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AP003973.1-201ENST00000604639 691 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 TUSC7.1-201ENST00000610969 165 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC009163.6-201ENST00000612367 342 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC234782.5-201ENST00000617723 324 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AP001005.3-201ENST00000622049 129 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC017037.3-201ENST00000625016 472 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 MTND2P41-201ENST00000637599 773 ntBASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.73□□□□□ -1.65
RUNDC3AQ59EK9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 AL672167.1-205ENST00000641112 3080 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 SNORA73.1-201ENST00000363107 205 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 Y_RNA.465-201ENST00000384293 102 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 AC009804.1-201ENST00000400949 179 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 SLC35E1P1-201ENST00000419313 864 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 EIF4HP2-201ENST00000424380 563 ntBASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.72□□□□□ -1.65
RUNDC3AQ59EK9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms