Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC023141.12-201ENST00000512399 199 ntBASIC4.1□□□□□ -1.75
HTTP42858 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.1□□□□□ -1.75
HTTP42858 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.1□□□□□ -1.75
HTTP42858 AC006539.2-201ENST00000601729 572 ntBASIC4.1□□□□□ -1.75
HTTP42858 AL390838.2-201ENST00000602394 274 ntBASIC4.1□□□□□ -1.75
HTTP42858 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC4.1□□□□□ -1.75
HTTP42858 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
HTTP42858 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.09□□□□□ -1.75
HTTP42858 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.09□□□□□ -1.75
HTTP42858 SKP1P3-201ENST00000429280 487 ntBASIC4.09□□□□□ -1.75
HTTP42858 NANOGNBP1-201ENST00000448444 480 ntBASIC4.09□□□□□ -1.75
HTTP42858 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.09□□□□□ -1.75
HTTP42858 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC4.09□□□□□ -1.75
HTTP42858 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HTTP42858 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HTTP42858 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HTTP42858 LIPT1P1-201ENST00000415870 1186 ntBASIC4.09□□□□□ -1.75
HTTP42858 AC093698.1-201ENST00000423843 571 ntBASIC4.09□□□□□ -1.75
HTTP42858 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.09□□□□□ -1.75
HTTP42858 OR5M7P-201ENST00000526140 972 ntBASIC4.09□□□□□ -1.75
HTTP42858 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
HTTP42858 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.09□□□□□ -1.75
HTTP42858 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.09□□□□□ -1.75
HTTP42858 AC010591.1-201ENST00000603941 649 ntBASIC4.09□□□□□ -1.75
HTTP42858 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.09□□□□□ -1.75
HTTP42858 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
HTTP42858 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HTTP42858 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HTTP42858 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HTTP42858 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.08□□□□□ -1.76
HTTP42858 RNU11-201ENST00000387069 134 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC107083.1-201ENST00000439643 279 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC073522.1-201ENST00000483312 377 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.08□□□□□ -1.76
HTTP42858 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.08□□□□□ -1.76
HTTP42858 AL360012.1-201ENST00000602813 131 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC136601.2-201ENST00000604356 474 ntBASIC4.08□□□□□ -1.76
HTTP42858 SNORA62.6-201ENST00000606322 83 ntBASIC4.08□□□□□ -1.76
HTTP42858 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.08□□□□□ -1.76
HTTP42858 AC068722.2-201ENST00000618734 544 ntBASIC4.08□□□□□ -1.76
HTTP42858 AL669831.5-218ENST00000591702 1873 ntBASIC4.08□□□□□ -1.76
HTTP42858 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HTTP42858 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HTTP42858 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HTTP42858 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
HTTP42858 RPL5P18-201ENST00000406671 891 ntBASIC4.08□□□□□ -1.76
HTTP42858 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.08□□□□□ -1.76
HTTP42858 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.08□□□□□ -1.76
HTTP42858 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.08□□□□□ -1.76
HTTP42858 AC007656.2-201ENST00000624902 4547 ntBASIC4.08□□□□□ -1.76
HTTP42858 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HTTP42858 COTL1P1-201ENST00000422309 375 ntBASIC4.08□□□□□ -1.76
HTTP42858 RPL23AP69-201ENST00000431134 458 ntBASIC4.08□□□□□ -1.76
HTTP42858 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.08□□□□□ -1.76
HTTP42858 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.08□□□□□ -1.76
HTTP42858 AP000553.6-201ENST00000641242 118 ntBASIC4.08□□□□□ -1.76
HTTP42858 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 AP001273.1-201ENST00000624493 3152 ntBASIC4.07□□□□□ -1.76
HTTP42858 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.07□□□□□ -1.76
HTTP42858 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.07□□□□□ -1.76
HTTP42858 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.07□□□□□ -1.76
HTTP42858 AC008833.1-201ENST00000611633 691 ntBASIC4.07□□□□□ -1.76
HTTP42858 AC015922.4-201ENST00000612568 690 ntBASIC4.07□□□□□ -1.76
HTTP42858 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.07□□□□□ -1.76
HTTP42858 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC4.07□□□□□ -1.76
HTTP42858 AC011503.2-201ENST00000594230 1500 ntBASIC4.07□□□□□ -1.76
HTTP42858 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
HTTP42858 HIGD1AP4-201ENST00000430194 280 ntBASIC4.07□□□□□ -1.76
HTTP42858 HMGB3P9-201ENST00000441799 583 ntBASIC4.07□□□□□ -1.76
HTTP42858 RPL7P59-201ENST00000447700 943 ntBASIC4.07□□□□□ -1.76
HTTP42858 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.07□□□□□ -1.76
HTTP42858 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
HTTP42858 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.07□□□□□ -1.76
HTTP42858 AL121603.1-201ENST00000553815 142 ntBASIC4.07□□□□□ -1.76
HTTP42858 AL354760.1-201ENST00000608357 643 ntBASIC4.07□□□□□ -1.76
HTTP42858 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HTTP42858 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.07□□□□□ -1.76
HTTP42858 SNORA44-201ENST00000384584 132 ntBASIC4.06□□□□□ -1.76
HTTP42858 AL136131.1-201ENST00000406079 803 ntBASIC4.06□□□□□ -1.76
HTTP42858 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.06□□□□□ -1.76
HTTP42858 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.06□□□□□ -1.76
HTTP42858 RPL5P12-201ENST00000477071 851 ntBASIC4.06□□□□□ -1.76
HTTP42858 AC006445.1-201ENST00000491925 405 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms