Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 U8.18-201ENST00000459285 133 ntBASIC5.14□□□□□ -1.59
RFC4P35249 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.14□□□□□ -1.59
RFC4P35249 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.14□□□□□ -1.59
RFC4P35249 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
RFC4P35249 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.14□□□□□ -1.59
RFC4P35249 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.14□□□□□ -1.59
RFC4P35249 AC025627.2-201ENST00000576220 160 ntBASIC5.14□□□□□ -1.59
RFC4P35249 AL159169.3-201ENST00000608871 561 ntBASIC5.14□□□□□ -1.59
RFC4P35249 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.14□□□□□ -1.59
RFC4P35249 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.14□□□□□ -1.59
RFC4P35249 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFC4P35249 AC123912.3-201ENST00000600907 1367 ntBASIC5.14□□□□□ -1.59
RFC4P35249 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 AC021242.1-201ENST00000507315 2035 ntBASIC5.13□□□□□ -1.59
RFC4P35249 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 RNA5SP105-201ENST00000391123 113 ntBASIC5.13□□□□□ -1.59
RFC4P35249 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 EIF4A1P1-201ENST00000420241 934 ntBASIC5.13□□□□□ -1.59
RFC4P35249 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC4P35249 AL358472.1-201ENST00000431295 329 ntBASIC5.13□□□□□ -1.59
RFC4P35249 NANOGP10-201ENST00000453325 895 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AC108751.2-201ENST00000469993 231 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AC090013.1-201ENST00000485147 480 ntBASIC5.13□□□□□ -1.59
RFC4P35249 RPL29P14-201ENST00000495837 428 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC4P35249 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 snoU109.6-201ENST00000516831 118 ntBASIC5.13□□□□□ -1.59
RFC4P35249 SNORA70.24-201ENST00000517233 118 ntBASIC5.13□□□□□ -1.59
RFC4P35249 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC4P35249 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC4P35249 AC027176.2-201ENST00000559166 746 ntBASIC5.13□□□□□ -1.59
RFC4P35249 MIR4472-2-201ENST00000582069 67 ntBASIC5.13□□□□□ -1.59
RFC4P35249 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC4P35249 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.13□□□□□ -1.59
RFC4P35249 AL160281.1-201ENST00000605307 311 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AL391497.1-201ENST00000608671 547 ntBASIC5.13□□□□□ -1.59
RFC4P35249 AC138627.1-204ENST00000641894 765 ntBASIC5.13□□□□□ -1.59
RFC4P35249 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RFC4P35249 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC4P35249 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFC4P35249 RN7SKP247-201ENST00000411094 308 ntBASIC5.12□□□□□ -1.59
RFC4P35249 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RFC4P35249 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.12□□□□□ -1.59
RFC4P35249 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.12□□□□□ -1.59
RFC4P35249 RPS3AP6-201ENST00000484430 795 ntBASIC5.12□□□□□ -1.59
RFC4P35249 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.12□□□□□ -1.59
RFC4P35249 KRT19P6-201ENST00000510983 209 ntBASIC5.12□□□□□ -1.59
RFC4P35249 RNU6-352P-201ENST00000516908 107 ntBASIC5.12□□□□□ -1.59
RFC4P35249 AC091516.1-201ENST00000549191 703 ntBASIC5.12□□□□□ -1.59
RFC4P35249 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RFC4P35249 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC4P35249 ERCC6-202ENST00000374127 1782 ntBASIC5.11□□□□□ -1.59
RFC4P35249 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC4P35249 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC4P35249 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RFC4P35249 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC4P35249 RPL21P17-201ENST00000397467 475 ntBASIC5.11□□□□□ -1.59
RFC4P35249 AL136131.1-201ENST00000406079 803 ntBASIC5.11□□□□□ -1.59
RFC4P35249 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC4P35249 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.11□□□□□ -1.59
RFC4P35249 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC4P35249 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC4P35249 PTMAP3-201ENST00000447474 330 ntBASIC5.11□□□□□ -1.59
RFC4P35249 ABCF2P2-201ENST00000450549 296 ntBASIC5.11□□□□□ -1.59
RFC4P35249 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms