Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 MTND5P1-201ENST00000445440 1375 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 AC245100.2-201ENST00000454544 1679 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 SNORA64.3-201ENST00000365647 134 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.42□□□□□ -1.38
NFKB1P19838 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 RNU6-463P-201ENST00000384340 107 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 MIR559-201ENST00000385188 96 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 RPL23AP32-201ENST00000395315 459 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 AL356967.1-201ENST00000406305 431 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AC127391.1-201ENST00000411737 98 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AC116036.1-201ENST00000412199 367 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.42□□□□□ -1.38
NFKB1P19838 AL161631.1-201ENST00000417933 486 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL022237.1-201ENST00000446663 358 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AC006480.1-201ENST00000449887 378 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.42□□□□□ -1.38
NFKB1P19838 SNORD19B-201ENST00000459623 84 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 ST13P14-201ENST00000474095 734 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 RN7SL369P-201ENST00000477138 299 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC112206.3-201ENST00000514578 389 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 SNORA40.12-201ENST00000516329 111 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 IGHV4-55-201ENST00000520889 368 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC008055.1-201ENST00000547032 609 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC005668.1-201ENST00000571142 476 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 MIR3189-201ENST00000578735 73 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AC026898.1-201ENST00000586404 571 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC090948.1-201ENST00000607464 549 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL133173.2-201ENST00000614270 90 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 AL138693.1-201ENST00000622219 129 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 AC099654.6-201ENST00000636487 512 ntBASIC6.42□□□□□ -1.38
NFKB1P19838 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.42□□□□□ -1.38
NFKB1P19838 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.42□□□□□ -1.38
NFKB1P19838 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NFKB1P19838 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.42□□□□□ -1.38
NFKB1P19838 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 ERCC6-202ENST00000374127 1782 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NFKB1P19838 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NFKB1P19838 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NFKB1P19838 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NFKB1P19838 RNU6-251P-201ENST00000363235 104 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 RNA5SP485-201ENST00000365053 119 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 SNORA70H-201ENST00000383910 135 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 SNORA70J-201ENST00000384182 135 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 MIR433-201ENST00000384837 93 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 RNU6-510P-201ENST00000391239 108 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 MTND3P8-201ENST00000412909 339 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 AC108059.2-201ENST00000434626 151 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC016691.1-201ENST00000441321 413 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AL672138.1-201ENST00000450604 1015 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 RPS27AP3-201ENST00000453803 454 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.41□□□□□ -1.38
NFKB1P19838 RNU7-27P-201ENST00000459281 62 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 RN7SL643P-201ENST00000471845 291 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 RPL12P31-201ENST00000478433 450 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 RPS3AP50-201ENST00000487064 803 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms