Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
CDH1P12830 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.53□□□□□ -1.68
CDH1P12830 AP001784.1-201ENST00000624107 428 ntBASIC4.53□□□□□ -1.68
CDH1P12830 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH1P12830 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH1P12830 KPNA2P2-201ENST00000419546 1489 ntBASIC4.53□□□□□ -1.68
CDH1P12830 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CDH1P12830 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CDH1P12830 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH1P12830 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CDH1P12830 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH1P12830 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH1P12830 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
CDH1P12830 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH1P12830 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH1P12830 AC010928.1-201ENST00000592477 1447 ntBASIC4.53□□□□□ -1.68
CDH1P12830 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH1P12830 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.69
CDH1P12830 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH1P12830 AL355578.1-201ENST00000607405 1328 ntBASIC4.52□□□□□ -1.69
CDH1P12830 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CDH1P12830 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 ZFRP1-201ENST00000457579 2970 ntBASIC4.52□□□□□ -1.69
CDH1P12830 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 AL590240.1-201ENST00000334118 313 ntBASIC4.52□□□□□ -1.69
CDH1P12830 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 RNA5SP87-201ENST00000384155 118 ntBASIC4.52□□□□□ -1.69
CDH1P12830 RNU6-244P-201ENST00000391028 104 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AC092638.1-201ENST00000411966 1275 ntBASIC4.52□□□□□ -1.69
CDH1P12830 HMGB3P31-201ENST00000413333 595 ntBASIC4.52□□□□□ -1.69
CDH1P12830 MTCO3P4-201ENST00000419236 787 ntBASIC4.52□□□□□ -1.69
CDH1P12830 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH1P12830 AC016831.4-201ENST00000438302 307 ntBASIC4.52□□□□□ -1.69
CDH1P12830 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH1P12830 AL591719.1-201ENST00000444669 744 ntBASIC4.52□□□□□ -1.69
CDH1P12830 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 H2AFZP5-201ENST00000446960 382 ntBASIC4.52□□□□□ -1.69
CDH1P12830 MTCYBP11-201ENST00000447254 1109 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AC092155.2-201ENST00000454675 477 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AC090142.1-201ENST00000465776 462 ntBASIC4.52□□□□□ -1.69
CDH1P12830 RN7SL41P-201ENST00000476144 297 ntBASIC4.52□□□□□ -1.69
CDH1P12830 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 BOLA3P3-201ENST00000505182 232 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH1P12830 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 AC087897.1-201ENST00000550134 156 ntBASIC4.52□□□□□ -1.69
CDH1P12830 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 AC011611.5-201ENST00000552477 578 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH1P12830 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
CDH1P12830 MIR4480-201ENST00000582492 71 ntBASIC4.52□□□□□ -1.69
CDH1P12830 ELOCP35-201ENST00000604289 336 ntBASIC4.52□□□□□ -1.69
CDH1P12830 PART1_2.1-201ENST00000612397 250 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AL355493.4-201ENST00000618530 292 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH1P12830 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH1P12830 AL359757.1-201ENST00000623176 255 ntBASIC4.52□□□□□ -1.69
CDH1P12830 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH1P12830 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDH1P12830 AC017104.5-201ENST00000637647 639 ntBASIC4.52□□□□□ -1.69
CDH1P12830 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
CDH1P12830 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 MTCO1P18-201ENST00000455518 1419 ntBASIC4.52□□□□□ -1.69
CDH1P12830 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH1P12830 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH1P12830 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH1P12830 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH1P12830 MTND4P26-201ENST00000415971 1359 ntBASIC4.52□□□□□ -1.69
CDH1P12830 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH1P12830 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH1P12830 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH1P12830 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH1P12830 AC107021.2-201ENST00000567714 2095 ntBASIC4.51□□□□□ -1.69
CDH1P12830 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH1P12830 RN7SKP103-201ENST00000363848 320 ntBASIC4.51□□□□□ -1.69
CDH1P12830 TAS2R15P-201ENST00000390674 928 ntBASIC4.51□□□□□ -1.69
CDH1P12830 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH1P12830 HMGB1P13-201ENST00000406019 642 ntBASIC4.51□□□□□ -1.69
CDH1P12830 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH1P12830 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH1P12830 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH1P12830 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH1P12830 PDSS1P1-201ENST00000422953 1114 ntBASIC4.51□□□□□ -1.69
CDH1P12830 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
CDH1P12830 RPL23AP4-201ENST00000427757 463 ntBASIC4.51□□□□□ -1.69
CDH1P12830 FO393419.3-201ENST00000428741 282 ntBASIC4.51□□□□□ -1.69
CDH1P12830 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH1P12830 HMGB3P9-201ENST00000441799 583 ntBASIC4.51□□□□□ -1.69
CDH1P12830 VN1R25P-201ENST00000443385 738 ntBASIC4.51□□□□□ -1.69
CDH1P12830 HSFY3P-201ENST00000444242 1191 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms