Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 AL035458.1-201ENST00000433096 585 ntBASIC5.02□□□□□ -1.61
MMP3P08254 MTCYBP12-201ENST00000440559 1134 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.02□□□□□ -1.61
MMP3P08254 MTND1P33-201ENST00000446251 917 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.02□□□□□ -1.61
MMP3P08254 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.02□□□□□ -1.61
MMP3P08254 RPS4XP6-201ENST00000477670 797 ntBASIC5.02□□□□□ -1.61
MMP3P08254 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
MMP3P08254 AC091167.1-201ENST00000492017 396 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AC021146.5-201ENST00000503544 545 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.02□□□□□ -1.61
MMP3P08254 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 SLC25A15P5-201ENST00000508033 253 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 SNORA31.9-201ENST00000516429 84 ntBASIC5.02□□□□□ -1.61
MMP3P08254 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.02□□□□□ -1.61
MMP3P08254 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.02□□□□□ -1.61
MMP3P08254 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 AC084824.1-201ENST00000550917 1005 ntBASIC5.02□□□□□ -1.61
MMP3P08254 RPP40P2-201ENST00000603596 712 ntBASIC5.02□□□□□ -1.61
MMP3P08254 Z82195.1-201ENST00000604558 398 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AC023043.4-201ENST00000612081 449 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AL669942.2-201ENST00000620352 697 ntBASIC5.02□□□□□ -1.61
MMP3P08254 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.02□□□□□ -1.61
MMP3P08254 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
MMP3P08254 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
MMP3P08254 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.02□□□□□ -1.61
MMP3P08254 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MMP3P08254 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MMP3P08254 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MMP3P08254 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 DHX9P1-201ENST00000436565 3076 ntBASIC5.01□□□□□ -1.61
MMP3P08254 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 AL121657.1-201ENST00000327215 531 ntBASIC5.01□□□□□ -1.61
MMP3P08254 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 RNA5SP366-201ENST00000365454 123 ntBASIC5.01□□□□□ -1.61
MMP3P08254 UBBP2-201ENST00000376781 231 ntBASIC5.01□□□□□ -1.61
MMP3P08254 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MMP3P08254 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.01□□□□□ -1.61
MMP3P08254 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AL592310.1-201ENST00000414330 671 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AL121878.1-201ENST00000418638 859 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.01□□□□□ -1.61
MMP3P08254 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AL031313.1-201ENST00000448435 256 ntBASIC5.01□□□□□ -1.61
MMP3P08254 HSPE1P22-201ENST00000456856 327 ntBASIC5.01□□□□□ -1.61
MMP3P08254 RPL7P19-201ENST00000469948 618 ntBASIC5.01□□□□□ -1.61
MMP3P08254 UQCRHP4-201ENST00000471686 272 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC105137.1-201ENST00000484355 562 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC041039.1-201ENST00000485656 536 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC113420.1-201ENST00000507903 571 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC093752.1-206ENST00000511823 336 ntBASIC5.01□□□□□ -1.61
MMP3P08254 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 DUX4L52-201ENST00000549363 777 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC025884.1-201ENST00000556034 378 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC090888.2-201ENST00000559765 1144 ntBASIC5.01□□□□□ -1.61
MMP3P08254 ZNF971P-201ENST00000562068 1249 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.01□□□□□ -1.61
MMP3P08254 SNORD39.2-201ENST00000579995 76 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AL365400.2-201ENST00000605604 902 ntBASIC5.01□□□□□ -1.61
MMP3P08254 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.01□□□□□ -1.61
MMP3P08254 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 AC079395.3-201ENST00000615161 484 ntBASIC5.01□□□□□ -1.61
MMP3P08254 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.01□□□□□ -1.61
MMP3P08254 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.01□□□□□ -1.61
MMP3P08254 AC006386.1-201ENST00000619436 415 ntBASIC5.01□□□□□ -1.61
MMP3P08254 AL023881.1-201ENST00000621088 301 ntBASIC5.01□□□□□ -1.61
MMP3P08254 MIR3653-201ENST00000625572 110 ntBASIC5.01□□□□□ -1.61
MMP3P08254 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
MMP3P08254 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.01□□□□□ -1.61
MMP3P08254 AC073136.1-201ENST00000449426 2884 ntBASIC5.01□□□□□ -1.61
MMP3P08254 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
MMP3P08254 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MMP3P08254 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.01□□□□□ -1.61
MMP3P08254 MFSD8-242ENST00000641690 4199 ntBASIC5.01□□□□□ -1.61
MMP3P08254 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MMP3P08254 SEPT7P7-201ENST00000420492 1301 ntBASIC5□□□□□ -1.61
MMP3P08254 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MMP3P08254 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
MMP3P08254 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MMP3P08254 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MMP3P08254 U6.112-201ENST00000384129 70 ntBASIC5□□□□□ -1.61
MMP3P08254 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 PTP4A1P1-201ENST00000420539 515 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms