Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL1A1P02452 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.71□□□□□ -1.65
COL1A1P02452 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL1A1P02452 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL1A1P02452 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COL1A1P02452 MIR34B-201ENST00000385076 84 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 ATP5F1P4-201ENST00000397288 746 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 RNU2-65P-201ENST00000410162 185 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 RPL21P6-201ENST00000479171 504 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 CAB39P1-201ENST00000502277 460 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
COL1A1P02452 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.71□□□□□ -1.66
COL1A1P02452 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.71□□□□□ -1.66
COL1A1P02452 AL157762.1-201ENST00000619612 415 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.71□□□□□ -1.66
COL1A1P02452 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL1A1P02452 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL1A1P02452 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL1A1P02452 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.71□□□□□ -1.66
COL1A1P02452 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
COL1A1P02452 AP002001.2-201ENST00000529025 1469 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 MAPK10-253ENST00000641010 4072 ntBASIC4.71□□□□□ -1.66
COL1A1P02452 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
COL1A1P02452 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL1A1P02452 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 RNA5SP52-201ENST00000362448 134 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.7□□□□□ -1.66
COL1A1P02452 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL1A1P02452 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 AC068533.1-201ENST00000418542 415 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 AC006484.1-201ENST00000435086 1884 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.7□□□□□ -1.66
COL1A1P02452 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.7□□□□□ -1.66
COL1A1P02452 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.7□□□□□ -1.66
COL1A1P02452 AL133162.1-201ENST00000463228 453 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 RN7SL585P-201ENST00000470538 280 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 IGKV2-38-201ENST00000517443 247 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.7□□□□□ -1.66
COL1A1P02452 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.7□□□□□ -1.66
COL1A1P02452 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.7□□□□□ -1.66
COL1A1P02452 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.7□□□□□ -1.66
COL1A1P02452 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.7□□□□□ -1.66
COL1A1P02452 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 U6.105-201ENST00000637379 88 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 AC073346.2-201ENST00000624724 2058 ntBASIC4.7□□□□□ -1.66
COL1A1P02452 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
COL1A1P02452 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
COL1A1P02452 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL1A1P02452 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
COL1A1P02452 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 MIR491-201ENST00000384877 84 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 ZNF602P-201ENST00000405929 924 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.69□□□□□ -1.66
COL1A1P02452 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 AC018635.1-201ENST00000468292 1030 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 NPM1P29-201ENST00000483112 803 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.69□□□□□ -1.66
COL1A1P02452 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.69□□□□□ -1.66
COL1A1P02452 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.69□□□□□ -1.66
COL1A1P02452 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 RNA5SP208-201ENST00000516156 78 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 SOD1P3-201ENST00000518682 454 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.69□□□□□ -1.66
COL1A1P02452 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.69□□□□□ -1.66
COL1A1P02452 MIR3200-201ENST00000580767 85 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.69□□□□□ -1.66
COL1A1P02452 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL159169.3-201ENST00000608871 561 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL669942.2-201ENST00000620352 697 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 AC027290.2-201ENST00000623210 18662 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL1A1P02452 SNORD3H-201ENST00000384486 214 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms