Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 CR769776.1-201ENST00000441254 787 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 RAB11AP1-201ENST00000442978 646 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 MRPL48P1-201ENST00000445390 636 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 Z73417.1-201ENST00000447373 778 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 RN7SL808P-201ENST00000496066 299 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 FTH1P24-201ENST00000503502 462 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC008638.1-201ENST00000506035 866 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AC110775.1-201ENST00000513721 462 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 OR5AZ1P-201ENST00000527448 943 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 MTATP6P24-201ENST00000576835 677 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 RN7SL435P-201ENST00000584418 282 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC015688.2-201ENST00000584523 262 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AC011487.3-201ENST00000593607 453 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC016877.3-201ENST00000606778 504 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AL445423.1-201ENST00000609941 536 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC105227.2-201ENST00000615075 605 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC008147.4-201ENST00000617570 1204 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AL158163.2-201ENST00000619110 700 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 ZNF652P1-201ENST00000442420 1309 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-2O95096 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 HMGB1P5-201ENST00000255320 642 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 snoZ40.1-201ENST00000364540 72 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 RNU6-636P-201ENST00000384598 107 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 MIR105-2-201ENST00000385083 81 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AL645927.1-201ENST00000396783 406 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 TMSB4XP8-201ENST00000402089 135 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 HNRNPDP2-201ENST00000406475 478 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC114755.2-201ENST00000413520 361 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 PRELID3BP11-201ENST00000414230 479 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 TMSB4XP6-201ENST00000415187 135 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 OR2AM1P-201ENST00000422137 422 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 TMSB4XP1-201ENST00000424567 135 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 IPMKP1-201ENST00000425988 855 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-2O95096 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC023347.2-201ENST00000433994 462 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 RPS17P8-201ENST00000434525 335 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 NMNAT1P2-201ENST00000435192 860 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC104306.1-201ENST00000449702 371 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AL591623.2-201ENST00000449978 222 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 snoU13.20-201ENST00000459180 104 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC005410.1-202ENST00000460347 485 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC004453.1-201ENST00000487895 408 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-2O95096 OR5M14P-201ENST00000506803 618 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 BTF3P13-201ENST00000513224 490 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 RNA5SP135-201ENST00000517019 125 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-2O95096 EEF1A1P37-201ENST00000522748 715 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 MIR3912-201ENST00000577566 105 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 RN7SL802P-201ENST00000577858 299 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC234772.3-201ENST00000602277 528 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms