Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 IQCB2P-201ENST00000401788 1633 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AL158163.1-201ENST00000603915 1649 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN2BO60939 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN2BO60939 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN2BO60939 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN2BO60939 RNA5SP36-201ENST00000410197 133 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN2BO60939 VDAC1P6-201ENST00000430062 855 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN2BO60939 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 MTCYBP29-201ENST00000436327 1006 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC109327.1-201ENST00000471666 403 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN2BO60939 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 RPS29P19-201ENST00000479709 171 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 RPS23P1-201ENST00000491662 432 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN2BO60939 AC093824.1-201ENST00000508796 343 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN2BO60939 RNA5SP49-201ENST00000516450 115 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 SNORD116-30-201ENST00000516468 85 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN2BO60939 MTND1P6-201ENST00000523621 946 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN2BO60939 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN2BO60939 AL161713.1-201ENST00000555538 145 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN2BO60939 AC068020.1-201ENST00000594215 661 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC083899.3-201ENST00000603413 594 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC010857.1-201ENST00000606398 594 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC016957.2-201ENST00000616998 848 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AL645927.2-201ENST00000618350 349 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN2BO60939 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN2BO60939 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN2BO60939 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN2BO60939 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
SCN2BO60939 AC018555.1-201ENST00000567548 1980 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AC100871.1-201ENST00000507871 1456 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN2BO60939 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SCN2BO60939 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 IGKV7-3-201ENST00000357453 298 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 U3.15-201ENST00000365398 212 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN2BO60939 RPS27AP7-201ENST00000422792 455 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 MTND2P11-201ENST00000423638 648 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 RPS29P17-201ENST00000430795 166 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN2BO60939 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 snoU13.1-201ENST00000459157 104 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 RN7SL738P-201ENST00000470264 297 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 RPS29P22-201ENST00000472363 168 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 RPL35P6-201ENST00000490024 372 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN2BO60939 RNA5SP519-201ENST00000516480 119 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.94□□□□□ -1.78
SCN2BO60939 AC107016.1-201ENST00000550463 337 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AC007424.1-203ENST00000554613 687 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN2BO60939 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN2BO60939 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 AP005264.7-201ENST00000625003 745 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 MARK2P15-201ENST00000432204 2186 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 AC092162.3-201ENST00000624511 1624 ntBASIC3.94□□□□□ -1.78
SCN2BO60939 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN2BO60939 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN2BO60939 MTCO1P14-201ENST00000441695 1559 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN2BO60939 AC017007.4-201ENST00000503353 1352 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 AC096656.1-201ENST00000623826 1364 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCN2BO60939 MIR320B1-201ENST00000390209 79 ntBASIC3.93□□□□□ -1.78
SCN2BO60939 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SCN2BO60939 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms