Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 AC008403.3-201ENST00000598924 454 ntBASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 AC141586.3-201ENST00000562166 1838 ntBASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.97■■□□□ 1.27
CYP46A1Q9Y6A2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 SDHAP1-207ENST00000440850 2000 ntBASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 RNA5SP413-201ENST00000516373 109 ntBASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CYP46A1Q9Y6A2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.95■■□□□ 1.27
CYP46A1Q9Y6A2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CYP46A1Q9Y6A2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 AC120498.9-201ENST00000339021 3867 ntBASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.95■■□□□ 1.26
CYP46A1Q9Y6A2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 AIRN-201ENST00000601203 4374 ntBASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CYP46A1Q9Y6A2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms