Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 C1QL1P1-201ENST00000568105 661 ntBASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.69■■□□□ 1.06
COL4A3BPQ9Y5P4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 AC026471.5-201ENST00000615068 467 ntBASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL4A3BPQ9Y5P4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 NIFKP9-201ENST00000419265 221 ntBASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 TUBB8P6-201ENST00000436895 1288 ntBASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
COL4A3BPQ9Y5P4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A3BPQ9Y5P4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.65■■□□□ 1.06
COL4A3BPQ9Y5P4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms