Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 TERF1P2-201ENST00000583350 1212 ntBASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB1Q9Y5G3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 KRT8P17-201ENST00000453110 1448 ntBASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 AC141586.3-201ENST00000562166 1838 ntBASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGB1Q9Y5G3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms