Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 AC090192.1-201ENST00000517740 490 ntBASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 AC098934.4-201ENST00000564127 592 ntBASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 HLA-B-256ENST00000639848 1089 ntBASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1DQ9Y2S0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 RPS2P52-201ENST00000469610 820 ntBASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AC060766.5-201ENST00000590539 871 ntBASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AC133041.1-202ENST00000642053 222 ntBASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 AC093484.2-201ENST00000580996 2166 ntBASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR1DQ9Y2S0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 AC124283.5-201ENST00000624661 1809 ntBASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 AL121906.2-201ENST00000621597 723 ntBASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 MYC-209ENST00000641252 345 ntBASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1DQ9Y2S0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 AL355802.2-201ENST00000402069 882 ntBASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 AC069152.1-201ENST00000438030 544 ntBASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 PNMA6B-201ENST00000538162 1200 ntBASIC17.28■□□□□ 0.36
POLR1DQ9Y2S0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms