Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 AC104417.2-201ENST00000562989 1793 ntBASIC26.54■■□□□ 1.84
NINLQ9Y2I6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26.54■■□□□ 1.84
NINLQ9Y2I6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 KRT18P57-201ENST00000443599 1254 ntBASIC26.54■■□□□ 1.84
NINLQ9Y2I6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 ECEL1P2-202ENST00000465689 757 ntBASIC26.54■■□□□ 1.84
NINLQ9Y2I6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 ZNF815P-204ENST00000434898 1737 ntBASIC26.54■■□□□ 1.84
NINLQ9Y2I6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC26.54■■□□□ 1.84
NINLQ9Y2I6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 INGX-201ENST00000359239 846 ntBASIC26.53■■□□□ 1.84
NINLQ9Y2I6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 AL121894.2-201ENST00000602977 491 ntBASIC26.53■■□□□ 1.84
NINLQ9Y2I6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NINLQ9Y2I6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 AC007663.1-201ENST00000438948 1240 ntBASIC26.52■■□□□ 1.84
NINLQ9Y2I6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 KRT8P11-201ENST00000409686 1436 ntBASIC26.52■■□□□ 1.84
NINLQ9Y2I6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NINLQ9Y2I6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC26.51■■□□□ 1.83
NINLQ9Y2I6 LBX2-AS1-202ENST00000603175 2083 ntBASIC26.51■■□□□ 1.83
NINLQ9Y2I6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 TSPY17P-201ENST00000450329 467 ntBASIC26.5■■□□□ 1.83
NINLQ9Y2I6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC26.5■■□□□ 1.83
NINLQ9Y2I6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.49■■□□□ 1.83
NINLQ9Y2I6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NINLQ9Y2I6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms