Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 RFPL4AP1-201ENST00000530883 850 ntBASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC30.98■■■□□ 2.55
RIMBP3Q9UFD9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 DNAJB3-202ENST00000449667 1266 ntBASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RIMBP3Q9UFD9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
RIMBP3Q9UFD9 NUS1P2-201ENST00000417358 873 ntBASIC30.96■■■□□ 2.55
RIMBP3Q9UFD9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC30.96■■■□□ 2.55
RIMBP3Q9UFD9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
RIMBP3Q9UFD9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RIMBP3Q9UFD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 TBC1D3P2-202ENST00000577902 1649 ntBASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 AL136038.4-201ENST00000603606 1261 ntBASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 AC134684.3-201ENST00000641758 218 ntBASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
RIMBP3Q9UFD9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 LBH-203ENST00000404397 543 ntTSL 4 BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 LBH-204ENST00000406087 559 ntTSL 4 BASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 AC093909.1-201ENST00000504731 1122 ntBASIC30.95■■■□□ 2.54
RIMBP3Q9UFD9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 METTL21AP1-201ENST00000438852 635 ntBASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RIMBP3Q9UFD9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 FAM8A3P-201ENST00000427218 844 ntBASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RIMBP3Q9UFD9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 KRT16P6-202ENST00000425692 1426 ntBASIC30.92■■■□□ 2.54
RIMBP3Q9UFD9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 Z69720.1-201ENST00000601483 472 ntBASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC30.91■■■□□ 2.54
RIMBP3Q9UFD9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms