Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AC114495.2-201ENST00000452686 437 ntBASIC22.16■■□□□ 1.14
RNF216Q9NWF9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 AC120498.8-201ENST00000614275 531 ntBASIC22.16■■□□□ 1.14
RNF216Q9NWF9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF216Q9NWF9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 AC013469.1-201ENST00000426985 403 ntBASIC22.15■■□□□ 1.14
RNF216Q9NWF9 AC012618.2-201ENST00000428058 849 ntBASIC22.15■■□□□ 1.14
RNF216Q9NWF9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 AC133681.1-201ENST00000465482 601 ntBASIC22.15■■□□□ 1.14
RNF216Q9NWF9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.15■■□□□ 1.14
RNF216Q9NWF9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF216Q9NWF9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF216Q9NWF9 GABARAPL3-202ENST00000624044 1851 ntBASIC22.14■■□□□ 1.13
RNF216Q9NWF9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AC022784.5-201ENST00000522241 437 ntBASIC22.14■■□□□ 1.13
RNF216Q9NWF9 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AL021368.1-201ENST00000607490 540 ntBASIC22.14■■□□□ 1.13
RNF216Q9NWF9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.14■■□□□ 1.13
RNF216Q9NWF9 AC012653.2-201ENST00000621880 420 ntBASIC22.14■■□□□ 1.13
RNF216Q9NWF9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF216Q9NWF9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AL445669.2-201ENST00000454425 421 ntBASIC22.13■■□□□ 1.13
RNF216Q9NWF9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 OR8K4P-201ENST00000534608 872 ntBASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AC068408.1-201ENST00000577406 1144 ntBASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF216Q9NWF9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
RNF216Q9NWF9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms