Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42SE1Q9NRR8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 AC008764.6-201ENST00000595909 2069 ntBASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CDC42SE1Q9NRR8 ABALON-201ENST00000629058 1903 ntBASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 AC009102.2-201ENST00000606772 1639 ntBASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 AC099063.4-201ENST00000641099 1602 ntBASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.97□□□□□ -0.81
CDC42SE1Q9NRR8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms