Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 AC239809.2-201ENST00000415381 517 ntBASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NECTIN3Q9NQS3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 FAM197Y4-202ENST00000622692 608 ntBASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 TFP1-202ENST00000475455 1573 ntBASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NECTIN3Q9NQS3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NECTIN3Q9NQS3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NECTIN3Q9NQS3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms